SOLTUB.AGRIA.G00000022123

Description : Ethylene-responsive transcription factor erf003

Gene families : OG_02_0006198 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022123
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_133

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009555	pollen development	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009620	response to fungus	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009736	cytokinin-activated signaling pathway	IEA	AHRD
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009751	response to salicylic acid	IEA	AHRD
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009873	ethylene-activated signaling pathway	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010143	cutin biosynthetic process	IEA	AHRD
BP	GO:0010166	wax metabolic process	IEA	AHRD
BP	GO:0010224	response to UV-B	IEA	AHRD
BP	GO:0010286	heat acclimation	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045595	regulation of cell differentiation	IEA	AHRD
BP	GO:0045892	negative regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050826	response to freezing	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070417	cellular response to cold	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	IEA	AHRD
BP	GO:0071497	cellular response to freezing	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900034	regulation of cellular response to heat	None	Extended
BP	GO:1900036	positive regulation of cellular response to heat	IEA	AHRD
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901568	fatty acid derivative metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000070	regulation of response to water deprivation	IEA	AHRD
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001708	cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0002240	response to molecule of oomycetes origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003002	regionalization	IEP	Predict GO terms from Neighborhoods
BP	GO:0003006	developmental process involved in reproduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004806	triglyceride lipase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0005811	lipid droplet	IEP	Predict GO terms from Neighborhoods
BP	GO:0006955	immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0008356	asymmetric cell division	IEP	Predict GO terms from Neighborhoods
CC	GO:0009505	plant-type cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0009527	plastid outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009561	megagametogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009581	detection of external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009582	detection of abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009590	detection of gravity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009627	systemic acquired resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009631	cold acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009640	photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009642	response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009647	skotomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009682	induced systemic resistance	IEP	Predict GO terms from Neighborhoods
CC	GO:0009707	chloroplast outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009888	tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009939	positive regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009956	radial pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009959	negative gravitropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009966	regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0010022	meristem determinacy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010031	circumnutation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010051	xylem and phloem pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010150	leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010158	abaxial cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010192	mucilage biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010229	inflorescence development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010336	gibberellic acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010431	seed maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010528	regulation of transposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0010529	negative regulation of transposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0010582	floral meristem determinacy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010600	regulation of auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010601	positive regulation of auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015908	fatty acid transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0030856	regulation of epithelial cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031057	negative regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031062	positive regulation of histone methylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0031225	anchored component of membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0031490	chromatin DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031969	chloroplast membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032352	positive regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033878	hormone-sensitive lipase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035065	regulation of histone acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035067	negative regulation of histone acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0040034	regulation of development, heterochronic	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0042826	histone deacetylase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043621	protein self-association	IEP	Predict GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045088	regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045604	regulation of epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045682	regulation of epidermis development	IEP	Predict GO terms from Neighborhoods
BP	GO:0045824	negative regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046886	positive regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047372	acylglycerol lipase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0048364	root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048437	floral organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048440	carpel development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048444	floral organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:0048509	regulation of meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	Predict GO terms from Neighborhoods
BP	GO:0048571	long-day photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0048572	short-day photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0048574	long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048575	short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048653	anther development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048731	system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048766	root hair initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050879	multicellular organismal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0051570	regulation of histone H3-K9 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051574	positive regulation of histone H3-K9 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0055063	sulfate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071484	cellular response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071486	cellular response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080060	integument development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090354	regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090355	positive regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090693	plant organ senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0099402	plant organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0140426	PAMP-triggered immunity signalling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1900109	regulation of histone H3-K9 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900111	positive regulation of histone H3-K9 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901983	regulation of protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901984	negative regulation of protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905392	plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000038	regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000122	negative regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000756	regulation of peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000757	negative regulation of peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000904	regulation of starch metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	7	56
IPR016177	DNA-bd_dom_sf	7	66

External Links

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SOLTUB.AGRIA.G00000022123

Expression Profile

Co-expression Networks

Functional Annotation