SOLTUB.AGRIA.G00000022467

Description : Gibberellin 20-oxidase 2

Gene families : OG_02_0003445 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022467
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_148

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009413	response to flooding	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	IEA	AHRD
BP	GO:0009648	photoperiodism	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009685	gibberellin metabolic process	None	Extended
BP	GO:0009686	gibberellin biosynthetic process	IEA	AHRD
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	IEA	AHRD
BP	GO:0009826	unidimensional cell growth	IEA	AHRD
BP	GO:0009908	flower development	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	IEA	AHRD
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0045544	gibberellin 20-oxidase activity	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048366	leaf development	IEA	AHRD
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048572	short-day photoperiodism	None	Extended
BP	GO:0048573	photoperiodism, flowering	None	Extended
BP	GO:0048575	short-day photoperiodism, flowering	IEA	AHRD
BP	GO:0048583	regulation of response to stimulus	IEA	AHRD
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0051707	response to other organism	IEA	AHRD
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEA	AHRD
BP	GO:0090567	reproductive shoot system development	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004575	sucrose alpha-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005253	anion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005310	dicarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005982	starch metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005984	disaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005985	sucrose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005987	sucrose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006073	cellular glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009313	oligosaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009501	amyloplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0009717	isoflavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015140	malate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015743	malate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0015926	glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0017096	acetylserotonin O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030186	melatonin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030187	melatonin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030761	8-hydroxyquercitin 8-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030766	11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0033799	myricetin 3'-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0033800	isoflavone 7-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044042	glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046352	disaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046903	secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048481	plant ovule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051865	protein autoubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0052575	carbohydrate localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0052576	carbohydrate storage	IEP	Predict GO terms from Neighborhoods
BP	GO:0061635	regulation of protein complex stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0071423	malate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071836	nectar secretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0090599	alpha-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102990	5-n-alk(en)ylresorcinol O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005123	Oxoglu/Fe-dep_dioxygenase	187	285
IPR026992	DIOX_N	53	157

External Links

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SOLTUB.AGRIA.G00000022467

Expression Profile

Co-expression Networks

Functional Annotation