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  5. SOLTUB.AGRIA.G00000022477

SOLTUB.AGRIA.G00000022477


Description : F-box and associated interaction domains-containing protein


Gene families : OG_02_0026583 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022477
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_169


Type GO Term Name Evidence Source
CC GO:0005829 cytosol IEA AHRD
BP GO:0009846 pollen germination IEA AHRD
BP GO:0009860 pollen tube growth IEA AHRD
MF GO:0016740 transferase activity IEA AHRD
BP GO:0050789 regulation of biological process IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0003978 UDP-glucose 4-epimerase activity IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0005795 Golgi stack IEP Predict GO terms from Neighborhoods
CC GO:0005802 trans-Golgi network IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006012 galactose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Predict GO terms from Neighborhoods
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006757 ATP generation from ADP IEP Predict GO terms from Neighborhoods
BP GO:0007623 circadian rhythm IEP Predict GO terms from Neighborhoods
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009225 nucleotide-sugar metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009292 horizontal gene transfer IEP Predict GO terms from Neighborhoods
BP GO:0009294 DNA-mediated transformation IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009566 fertilization IEP Predict GO terms from Neighborhoods
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0009642 response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Predict GO terms from Neighborhoods
BP GO:0009736 cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009909 regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0009910 negative regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009969 xyloglucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010088 phloem development IEP Predict GO terms from Neighborhoods
BP GO:0010151 chloroplast elongation IEP Predict GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Predict GO terms from Neighborhoods
BP GO:0010187 negative regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010192 mucilage biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010289 homogalacturonan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010383 cell wall polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010394 homogalacturonan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010410 hemicellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010411 xyloglucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010413 glucuronoxylan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010417 glucuronoxylan biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016854 racemase and epimerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predict GO terms from Neighborhoods
MF GO:0019187 beta-1,4-mannosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019320 hexose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019388 galactose catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032104 regulation of response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032107 regulation of response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0033356 UDP-L-arabinose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033358 UDP-L-arabinose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033499 galactose catabolic process via UDP-galactose IEP Predict GO terms from Neighborhoods
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0042803 protein homodimerization activity IEP Predict GO terms from Neighborhoods
BP GO:0043610 regulation of carbohydrate utilization IEP Predict GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044264 cellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045226 extracellular polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045227 capsule polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045230 capsule organization IEP Predict GO terms from Neighborhoods
BP GO:0045491 xylan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045492 xylan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046031 ADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046365 monosaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046379 extracellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0046939 nucleotide phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Predict GO terms from Neighborhoods
MF GO:0047259 glucomannan 4-beta-mannosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048358 mucilage pectin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048363 mucilage pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048511 rhythmic process IEP Predict GO terms from Neighborhoods
BP GO:0048571 long-day photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0048574 long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048831 regulation of shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0048868 pollen tube development IEP Predict GO terms from Neighborhoods
MF GO:0050373 UDP-arabinose 4-epimerase activity IEP Predict GO terms from Neighborhoods
BP GO:0051592 response to calcium ion IEP Predict GO terms from Neighborhoods
MF GO:0051753 mannan synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0052325 cell wall pectin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052546 cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0055063 sulfate ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0061615 glycolytic process through fructose-6-phosphate IEP Predict GO terms from Neighborhoods
BP GO:0061620 glycolytic process through glucose-6-phosphate IEP Predict GO terms from Neighborhoods
BP GO:0061622 glycolytic process through glucose-1-phosphate IEP Predict GO terms from Neighborhoods
BP GO:0061623 glycolytic process from galactose IEP Predict GO terms from Neighborhoods
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071484 cellular response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071486 cellular response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0072505 divalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0080001 mucilage extrusion from seed coat IEP Predict GO terms from Neighborhoods
BP GO:0080050 regulation of seed development IEP Predict GO terms from Neighborhoods
BP GO:0080164 regulation of nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090056 regulation of chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901465 positive regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902326 positive regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1905177 tracheary element differentiation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001810 F-box_dom 33 74
IPR006527 F-box-assoc_dom_typ1 230 351
IPR029044 Nucleotide-diphossugar_trans 423 646
IPR036047 F-box-like_dom_sf 32 83
IPR017451 F-box-assoc_interact_dom 135 357
No external refs found!