SOLTUB.AGRIA.G00000002358

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_02_0012020 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002358
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_147

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	IEA	AHRD
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006468	protein phosphorylation	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0000076	DNA replication checkpoint signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0000228	nuclear chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000793	condensed chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000794	condensed nuclear chromosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0001653	peptide receptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0001673	male germ cell nucleus	IEP	Predict GO terms from Neighborhoods
MF	GO:0005227	calcium activated cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005261	cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005262	calcium channel activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006275	regulation of DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006816	calcium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006833	water transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007275	multicellular organism development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007389	pattern specification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008356	asymmetric cell division	IEP	Predict GO terms from Neighborhoods
MF	GO:0008381	mechanosensitive ion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009625	response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:0009888	tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010016	shoot system morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010030	positive regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010070	zygote asymmetric cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0010078	maintenance of root meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010082	regulation of root meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010212	response to ionizing radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010453	regulation of cell fate commitment	IEP	Predict GO terms from Neighborhoods
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0015629	actin cytoskeleton	IEP	Predict GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0016605	PML body	IEP	Predict GO terms from Neighborhoods
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022839	ion gated channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030174	regulation of DNA-templated DNA replication initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031570	DNA integrity checkpoint signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0033135	regulation of peptidyl-serine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033138	positive regulation of peptidyl-serine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0033674	positive regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034502	protein localization to chromosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0035561	regulation of chromatin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035563	positive regulation of chromatin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042044	fluid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042659	regulation of cell fate specification	IEP	Predict GO terms from Neighborhoods
CC	GO:0043073	germ cell nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045860	positive regulation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0048226	Casparian strip	IEP	Predict GO terms from Neighborhoods
BP	GO:0048229	gametophyte development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048608	reproductive structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048638	regulation of developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0050801	ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051099	positive regulation of binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051262	protein tetramerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051924	regulation of calcium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055075	potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0065001	specification of axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0065004	protein-DNA complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0070588	calcium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071163	DNA replication preinitiation complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071165	GINS complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071168	protein localization to chromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071474	cellular hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0080027	response to herbivore	IEP	Predict GO terms from Neighborhoods
BP	GO:0090279	regulation of calcium ion import	IEP	Predict GO terms from Neighborhoods
BP	GO:0090329	regulation of DNA-templated DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0090708	specification of plant organ axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098771	inorganic ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0104004	cellular response to environmental stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:1903224	regulation of endodermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000067	regulation of root morphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR016024	ARM-type_fold	515	929
IPR036322	WD40_repeat_dom_sf	1035	1283
IPR001680	WD40_repeat	1073	1107

External Links

No external refs found!

SOLTUB.AGRIA.G00000002358

Expression Profile

Co-expression Networks

Functional Annotation