Description : Microbial collagenase
Gene families : OG_02_0020074 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022620 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_241 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000741 | karyogamy | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000791 | euchromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000974 | Prp19 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001578 | microtubule bundle formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001701 | in utero embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001837 | epithelial to mesenchymal transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001893 | maternal placenta development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002181 | cytoplasmic translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002200 | somatic diversification of immune receptors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003730 | mRNA 3'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005700 | polytene chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005844 | polysome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005856 | cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006379 | mRNA cleavage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006928 | obsolete movement of cell or subcellular component | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007017 | microtubule-based process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007093 | mitotic cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007095 | mitotic G2 DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007319 | negative regulation of oskar mRNA translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007369 | gastrulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007399 | nervous system development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010197 | polar nucleus fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010389 | regulation of G2/M transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010632 | regulation of epithelial cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010634 | positive regulation of epithelial cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010972 | negative regulation of G2/M transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016445 | somatic diversification of immunoglobulins | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019003 | GDP binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019221 | cytokine-mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030371 | translation repressor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030447 | filamentous growth | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030955 | potassium ion binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031053 | primary miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031110 | regulation of microtubule polymerization or depolymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031112 | positive regulation of microtubule polymerization or depolymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031113 | regulation of microtubule polymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031116 | positive regulation of microtubule polymerization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031334 | positive regulation of protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031491 | nucleosome binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031982 | vesicle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032104 | regulation of response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032106 | positive regulation of response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032107 | regulation of response to nutrient levels | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032109 | positive regulation of response to nutrient levels | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032273 | positive regulation of protein polymerization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033119 | negative regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033120 | positive regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034046 | poly(G) binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035097 | histone methyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035101 | FACT complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035198 | miRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035613 | RNA stem-loop binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036002 | pre-mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042770 | signal transduction in response to DNA damage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043087 | regulation of GTPase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043186 | P granule | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043230 | extracellular organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043547 | positive regulation of GTPase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043967 | histone H4 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044182 | filamentous growth of a population of unicellular organisms | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044665 | MLL1/2 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044773 | mitotic DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044774 | mitotic DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044818 | mitotic G2/M transition checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046011 | regulation of oskar mRNA translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048025 | negative regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048026 | positive regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048027 | mRNA 5'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048568 | embryonic organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048762 | mesenchymal cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048864 | stem cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050685 | positive regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050686 | negative regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051569 | regulation of histone H3-K4 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060135 | maternal process involved in female pregnancy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060236 | regulation of mitotic spindle organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061980 | regulatory RNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0065010 | extracellular membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070062 | extracellular exosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070300 | phosphatidic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070507 | regulation of microtubule cytoskeleton organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070717 | poly-purine tract binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071007 | U2-type catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071014 | post-mRNA release spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071216 | cellular response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072359 | circulatory system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072396 | response to cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072402 | response to DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072423 | response to DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090169 | regulation of spindle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090224 | regulation of spindle organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097157 | pre-mRNA intronic binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098787 | mRNA cleavage involved in mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098789 | pre-mRNA cleavage required for polyadenylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099522 | cytosolic region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099523 | presynaptic cytosol | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901673 | regulation of mitotic spindle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902115 | regulation of organelle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902275 | regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902493 | acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902562 | H4 histone acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902749 | regulation of cell cycle G2/M phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902750 | negative regulation of cell cycle G2/M phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903312 | negative regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1903561 | extracellular vesicle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903684 | regulation of border follicle cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903688 | positive regulation of border follicle cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903832 | regulation of cellular response to amino acid starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903833 | positive regulation of cellular response to amino acid starvation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990247 | N6-methyladenosine-containing RNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |