SOLTUB.AGRIA.G00000022637

Description : TCP family transcription factor

Gene families : OG_02_0015347 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022637
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_23

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0001216	DNA-binding transcription activator activity	IEA	AHRD
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008285	negative regulation of cell population proliferation	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	IEA	AHRD
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009908	flower development	IEA	AHRD
BP	GO:0009965	leaf morphogenesis	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010099	regulation of photomorphogenesis	None	Extended
BP	GO:0010150	leaf senescence	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040008	regulation of growth	IEA	AHRD
BP	GO:0042127	regulation of cell population proliferation	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048262	determination of dorsal/ventral asymmetry	IEA	AHRD
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048582	positive regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048598	embryonic morphogenesis	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048826	cotyledon morphogenesis	IEA	AHRD
BP	GO:0048831	regulation of shoot system development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060688	regulation of morphogenesis of a branching structure	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
BP	GO:0090693	plant organ senescence	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEA	AHRD
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:1905428	regulation of plant organ formation	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000030	regulation of response to red or far red light	None	Extended
BP	GO:2000032	regulation of secondary shoot formation	IEA	AHRD
BP	GO:2000306	positive regulation of photomorphogenesis	IEA	AHRD
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0002155	regulation of thyroid hormone mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002254	kinin cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0002353	plasma kallikrein-kinin cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0002526	acute inflammatory response	IEP	Predict GO terms from Neighborhoods
BP	GO:0003002	regionalization	IEP	Predict GO terms from Neighborhoods
BP	GO:0003085	negative regulation of systemic arterial blood pressure	IEP	Predict GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006954	inflammatory response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007039	protein catabolic process in the vacuole	IEP	Predict GO terms from Neighborhoods
MF	GO:0008131	primary amine oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008169	C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008217	regulation of blood pressure	IEP	Predict GO terms from Neighborhoods
MF	GO:0008239	dipeptidyl-peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009299	mRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0009739	response to gibberellin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009823	cytokinin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009888	tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010026	trichome differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010050	vegetative phase change	IEP	Predict GO terms from Neighborhoods
BP	GO:0010051	xylem and phloem pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010094	specification of carpel identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010158	abaxial cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010222	stem vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010311	lateral root formation	IEP	Predict GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010334	sesquiterpene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010594	regulation of endothelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010930	negative regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0015245	fatty acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predict GO terms from Neighborhoods
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
MF	GO:0030795	methyl jasmonate methylesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033383	geranyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0035577	azurophil granule membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042447	hormone catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043535	regulation of blood vessel endothelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0045165	cell fate commitment	IEP	Predict GO terms from Neighborhoods
CC	GO:0045178	basal part of cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0045776	negative regulation of blood pressure	IEP	Predict GO terms from Neighborhoods
MF	GO:0046983	protein dimerization activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047461	(+)-delta-cadinene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048366	leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048437	floral organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048442	sepal development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048480	stigma development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048507	meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048653	anther development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048825	cotyledon development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051761	sesquiterpene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051762	sesquiterpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052624	2-phytyl-1,4-naphthoquinone methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060055	angiogenesis involved in wound healing	IEP	Predict GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072376	protein activation cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0080051	cutin transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0080150	S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080172	petal epidermis patterning	IEP	Predict GO terms from Neighborhoods
BP	GO:0090376	seed trichome differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090377	seed trichome initiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0090482	vitamin transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097009	energy homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0101003	ficolin-1-rich granule membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0150104	transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods
BP	GO:1901926	cadinene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901928	cadinene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905146	lysosomal protein catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR017887	TF_TCP_subgr	119	280

External Links

No external refs found!

SOLTUB.AGRIA.G00000022637

Expression Profile

Co-expression Networks

Functional Annotation