SOLTUB.AGRIA.G00000022699

Description : Chlorophyll a-b binding protein, chloroplastic

Gene families : OG_02_0009583 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022699
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_49

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	AHRD
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	IEA	AHRD
BP	GO:0009645	response to low light intensity stimulus	IEA	AHRD
BP	GO:0009765	photosynthesis, light harvesting	None	Extended
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEA	AHRD
CC	GO:0009782	photosystem I antenna complex	IEA	AHRD
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010287	plastoglobule	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
MF	GO:0016168	chlorophyll binding	IEA	AHRD
BP	GO:0018298	obsolete protein-chromophore linkage	IEA	AHRD
MF	GO:0019904	protein domain specific binding	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0031409	pigment binding	IEA	AHRD
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0080167	response to karrikin	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004316	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004373	glycogen (starch) synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005997	xylulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006766	vitamin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006768	biotin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006772	thiamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008874	gluconate 5-dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008875	gluconate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009011	starch synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009102	biotin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009110	vitamin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009228	thiamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009269	response to desiccation	IEP	Predict GO terms from Neighborhoods
CC	GO:0009501	amyloplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009503	thylakoid light-harvesting complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009517	PSII associated light-harvesting complex II	IEP	Predict GO terms from Neighborhoods
CC	GO:0009522	photosystem I	IEP	Predict GO terms from Neighborhoods
CC	GO:0009538	photosystem I reaction center	IEP	Predict GO terms from Neighborhoods
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0009639	response to red or far red light	IEP	Predict GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0009769	photosynthesis, light harvesting in photosystem II	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010019	chloroplast-nucleus signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010021	amylopectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010114	response to red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010119	regulation of stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010189	vitamin E biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010196	nonphotochemical quenching	IEP	Predict GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010218	response to far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016744	transketolase or transaldolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019252	starch biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019520	aldonic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019523	L-idonate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019684	photosynthesis, light reaction	IEP	Predict GO terms from Neighborhoods
CC	GO:0030076	light-harvesting complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030094	plasma membrane-derived photosystem I	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030497	fatty acid elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030835	negative regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031676	plasma membrane-derived thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031969	chloroplast membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031978	plastid thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032870	cellular response to hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0033115	cyanelle thylakoid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0033201	alpha-1,4-glucan synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033385	geranylgeranyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033519	phytyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033521	phytyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034309	primary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036068	light-independent chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042360	vitamin E metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042717	plasma membrane-derived chromatophore membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045010	actin nucleation	IEP	Predict GO terms from Neighborhoods
MF	GO:0045550	geranylgeranyl reductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046176	aldonic acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046183	L-idonate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0048529	magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051016	barbed-end actin filament capping	IEP	Predict GO terms from Neighborhoods
MF	GO:0051219	phosphoprotein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051693	actin filament capping	IEP	Predict GO terms from Neighborhoods
BP	GO:0052863	1-deoxy-D-xylulose 5-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052865	1-deoxy-D-xylulose 5-phosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071396	cellular response to lipid	IEP	Predict GO terms from Neighborhoods
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0090333	regulation of stomatal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:0097306	cellular response to alcohol	IEP	Predict GO terms from Neighborhoods
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0102067	geranylgeranyl diphosphate reductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903428	positive regulation of reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990066	energy quenching	IEP	Predict GO terms from Neighborhoods
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000379	positive regulation of reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000896	amylopectin metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR022796	Chloroa_b-bind	62	221

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SOLTUB.AGRIA.G00000022699

Expression Profile

Co-expression Networks

Functional Annotation