SOLTUB.AGRIA.G00000022780

Description : Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein

Gene families : OG_02_0009621 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022780
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_118

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
BP	GO:0002230	positive regulation of defense response to virus by host	IEA	AHRD
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002684	positive regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002833	positive regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	AHRD
MF	GO:0003723	RNA binding	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005694	chromosome	IEA	AHRD
CC	GO:0005768	endosome	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006282	regulation of DNA repair	IEA	AHRD
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007129	homologous chromosome pairing at meiosis	IEA	AHRD
BP	GO:0007276	gamete generation	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
CC	GO:0009526	plastid envelope	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010112	regulation of systemic acquired resistance	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	None	Extended
CC	GO:0010369	chromocenter	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010942	positive regulation of cell death	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
CC	GO:0016604	nuclear body	IEA	AHRD
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0031047	gene silencing by RNA	None	Extended
BP	GO:0031048	small non-coding RNA-dependent heterochromatin formation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031349	positive regulation of defense response	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
BP	GO:0031507	heterochromatin formation	None	Extended
BP	GO:0031935	obsolete regulation of chromatin silencing	IEA	AHRD
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032103	positive regulation of response to external stimulus	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034052	positive regulation of plant-type hypersensitive response	IEA	AHRD
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
MF	GO:0042393	histone binding	IEA	AHRD
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043068	positive regulation of programmed cell death	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
MF	GO:0043621	protein self-association	IEA	AHRD
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044030	regulation of DNA methylation	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045089	positive regulation of innate immune response	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048869	cellular developmental process	IEA	AHRD
BP	GO:0050688	regulation of defense response to virus	None	Extended
BP	GO:0050691	regulation of defense response to virus by host	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050778	positive regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEA	AHRD
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140718	facultative heterochromatin formation	None	Extended
BP	GO:1900424	regulation of defense response to bacterium	None	Extended
BP	GO:1900426	positive regulation of defense response to bacterium	IEA	AHRD
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901672	positive regulation of systemic acquired resistance	IEA	AHRD
BP	GO:1902288	regulation of defense response to oomycetes	None	Extended
BP	GO:1902290	positive regulation of defense response to oomycetes	IEA	AHRD
BP	GO:1903046	meiotic cell cycle process	None	Extended
BP	GO:1990918	double-strand break repair involved in meiotic recombination	IEA	AHRD
BP	GO:2001020	regulation of response to DNA damage stimulus	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000710	meiotic mismatch repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0000712	resolution of meiotic recombination intermediates	IEP	Predict GO terms from Neighborhoods
BP	GO:0000740	nuclear membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0000741	karyogamy	IEP	Predict GO terms from Neighborhoods
CC	GO:0000775	chromosome, centromeric region	IEP	Predict GO terms from Neighborhoods
CC	GO:0000779	condensed chromosome, centromeric region	IEP	Predict GO terms from Neighborhoods
CC	GO:0000794	condensed nuclear chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000800	lateral element	IEP	Predict GO terms from Neighborhoods
BP	GO:0000919	cell plate assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0001947	heart looping	IEP	Predict GO terms from Neighborhoods
MF	GO:0002083	4-hydroxybenzoate decaprenyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0002094	polyprenyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0003143	embryonic heart tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0003179	heart valve morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0003181	atrioventricular valve morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0003187	ventriculo bulbo valve morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0003684	damaged DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003756	protein disulfide isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004337	geranyltranstransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004659	prenyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004697	protein kinase C activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004698	calcium-dependent protein kinase C activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005547	phosphatidylinositol-3,4,5-trisphosphate binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005666	RNA polymerase III complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005721	pericentric heterochromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0005736	RNA polymerase I complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006071	glycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen	IEP	Predict GO terms from Neighborhoods
BP	GO:0006298	mismatch repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006310	DNA recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006360	transcription by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
BP	GO:0006383	transcription by RNA polymerase III	IEP	Predict GO terms from Neighborhoods
BP	GO:0006458	'de novo' protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006497	protein lipidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006743	ubiquinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006744	ubiquinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007062	sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007130	synaptonemal complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007131	reciprocal meiotic recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0007349	cellularization	IEP	Predict GO terms from Neighborhoods
BP	GO:0008015	blood circulation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008412	4-hydroxybenzoate octaprenyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009558	embryo sac cellularization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009561	megagametogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0009931	calcium-dependent protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010197	polar nucleus fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010198	synergid death	IEP	Predict GO terms from Neighborhoods
BP	GO:0010623	programmed cell death involved in cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010777	meiotic mismatch repair involved in reciprocal meiotic recombination	IEP	Predict GO terms from Neighborhoods
MF	GO:0010857	calcium-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010950	positive regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010952	positive regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016989	sigma factor antagonist activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019400	alditol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019646	aerobic electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0030447	filamentous growth	IEP	Predict GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0030983	mismatched DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031304	intrinsic component of mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031305	integral component of mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0032592	integral component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034502	protein localization to chromosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0035694	mitochondrial protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035825	homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0042026	protein refolding	IEP	Predict GO terms from Neighborhoods
CC	GO:0043073	germ cell nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0043280	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043281	regulation of cysteine-type endopeptidase activity involved in apoptotic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043325	phosphatidylinositol-3,4-bisphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044182	filamentous growth of a population of unicellular organisms	IEP	Predict GO terms from Neighborhoods
MF	GO:0047293	4-hydroxybenzoate nonaprenyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048484	enteric nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048703	embryonic viscerocranium morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050000	chromosome localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050830	defense response to Gram-positive bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:0051026	chiasma assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0051084	'de novo' post-translational protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEP	Predict GO terms from Neighborhoods
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0060037	pharyngeal system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060562	epithelial tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061061	muscle structure development	IEP	Predict GO terms from Neighborhoods
MF	GO:0061776	topological DNA co-entrapment activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061780	mitotic cohesin loading	IEP	Predict GO terms from Neighborhoods
BP	GO:0070193	synaptonemal complex organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0070197	meiotic attachment of telomere to nuclear envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0070601	centromeric sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071168	protein localization to chromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:0071763	nuclear membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071921	cohesin loading	IEP	Predict GO terms from Neighborhoods
BP	GO:0072520	seminiferous tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072583	clathrin-dependent endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0097240	chromosome attachment to the nuclear envelope	IEP	Predict GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098573	intrinsic component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099115	chromosome, subtelomeric region	IEP	Predict GO terms from Neighborhoods
CC	GO:0110092	nucleus leading edge	IEP	Predict GO terms from Neighborhoods
BP	GO:0140527	reciprocal homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:1901661	quinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901663	quinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903525	regulation of membrane tubulation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903527	positive regulation of membrane tubulation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903729	regulation of plasma membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1990414	replication-born double-strand break repair via sister chromatid exchange	IEP	Predict GO terms from Neighborhoods
BP	GO:2000116	regulation of cysteine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2001056	positive regulation of cysteine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR041006	Morc_S5	319	458
IPR036890	HATPase_C_sf	91	293

External Links

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SOLTUB.AGRIA.G00000022780

Expression Profile

Co-expression Networks

Functional Annotation