SOLTUB.AGRIA.G00000022804

Description : Tetratricopeptide repeat (TPR)-containing protein

Gene families : OG_02_0004694 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022804
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_248

Type	GO Term	Name	Evidence	Source
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001933	negative regulation of protein phosphorylation	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005739	mitochondrion	IEA	AHRD
BP	GO:0006486	protein glycosylation	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	IEA	AHRD
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010468	regulation of gene expression	IEA	AHRD
BP	GO:0010563	negative regulation of phosphorus metabolic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0016570	histone modification	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	IEA	AHRD
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	IEA	AHRD
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031400	negative regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032868	response to insulin	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042326	negative regulation of phosphorylation	None	Extended
CC	GO:0042995	cell projection	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0043434	response to peptide hormone	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045936	negative regulation of phosphate metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	IEA	AHRD
BP	GO:0048731	system development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	IEA	AHRD
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	IEA	AHRD
CC	GO:0140535	intracellular protein-containing complex	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901652	response to peptide	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	IEA	AHRD
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	IEA	AHRD
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEA	AHRD

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000026	alpha-1,2-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0000030	mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000380	alternative mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000812	Swr1 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001822	kidney development	IEP	Predict GO terms from Neighborhoods
CC	GO:0002944	cyclin K-CDK12 complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0002945	cyclin K-CDK13 complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0003825	alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004174	electron-transferring-flavoprotein dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004376	glycolipid mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004377	GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004805	trehalose-phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005048	signal sequence binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005463	UDP-N-acetylgalactosamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005504	fatty acid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005677	chromatin silencing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005759	mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0005991	trehalose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005992	trehalose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006349	regulation of gene expression by genomic imprinting	IEP	Predict GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006487	protein N-linked glycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006544	glycine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006551	leucine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006552	leucine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006566	threonine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006567	threonine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006606	protein import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006607	NLS-bearing protein import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006954	inflammatory response	IEP	Predict GO terms from Neighborhoods
MF	GO:0008139	nuclear localization sequence binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009063	cellular amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009068	aspartate family amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009083	branched-chain amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010048	vernalization response	IEP	Predict GO terms from Neighborhoods
MF	GO:0015136	sialic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015739	sialic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015789	UDP-N-acetylgalactosamine transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016649	oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019239	deaminase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019518	L-threonine catabolic process to glycine	IEP	Predict GO terms from Neighborhoods
CC	GO:0019908	nuclear cyclin-dependent protein kinase holoenzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030173	integral component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0030324	lung development	IEP	Predict GO terms from Neighborhoods
MF	GO:0030332	cyclin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030660	Golgi-associated vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031301	integral component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031304	intrinsic component of mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031305	integral component of mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031519	PcG protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031974	membrane-enclosed lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032592	integral component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032786	positive regulation of DNA-templated transcription, elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
MF	GO:0033293	monocarboxylic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0033539	fatty acid beta-oxidation using acyl-CoA dehydrogenase	IEP	Predict GO terms from Neighborhoods
BP	GO:0033619	membrane protein proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0033962	P-body assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034063	stress granule assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034243	regulation of transcription elongation by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0034620	cellular response to unfolded protein	IEP	Predict GO terms from Neighborhoods
CC	GO:0035267	NuA4 histone acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0035967	cellular response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
MF	GO:0036041	long-chain fatty acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042246	tissue regeneration	IEP	Predict GO terms from Neighborhoods
MF	GO:0042500	aspartic endopeptidase activity, intramembrane cleaving	IEP	Predict GO terms from Neighborhoods
CC	GO:0043189	H4/H2A histone acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0043233	organelle lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0043405	regulation of MAP kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043486	histone exchange	IEP	Predict GO terms from Neighborhoods
BP	GO:0043968	histone H2A acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0048038	quinone binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0048039	ubiquinone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048440	carpel development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050678	regulation of epithelial cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050680	negative regulation of epithelial cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050779	RNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051341	regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051354	negative regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055021	regulation of cardiac muscle tissue growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0060043	regulation of cardiac muscle cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060420	regulation of heart growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0061026	cardiac muscle tissue regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0061157	mRNA destabilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0061608	nuclear import signal receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0070013	intracellular organelle lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0070314	G1 to G0 transition	IEP	Predict GO terms from Neighborhoods
BP	GO:0070734	histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0071458	integral component of cytoplasmic side of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0071556	integral component of lumenal side of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090594	inflammatory response to wounding	IEP	Predict GO terms from Neighborhoods
CC	GO:0097346	INO80-type complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097502	mannosylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0098573	intrinsic component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0120241	2-iminobutanoate/2-iminopropanoate deaminase	IEP	Predict GO terms from Neighborhoods
MF	GO:0120242	2-iminobutanoate deaminase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901799	negative regulation of proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902183	regulation of shoot apical meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:1902288	regulation of defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:1902290	positive regulation of defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
CC	GO:1902562	H4 histone acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1903051	negative regulation of proteolysis involved in protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903069	regulation of ER-associated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903070	negative regulation of ER-associated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903573	negative regulation of response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1903856	regulation of cytokinin dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1903857	negative regulation of cytokinin dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904292	regulation of ERAD pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1904293	negative regulation of ERAD pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:1904813	ficolin-1-rich granule lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:1905897	regulation of response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1990569	UDP-N-acetylglucosamine transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000059	negative regulation of ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000736	regulation of stem cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000737	negative regulation of stem cell differentiation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011990	TPR-like_helical_dom_sf	150	324
IPR019734	TPR_repeat	156	184
IPR013105	TPR_2	373	405
IPR011990	TPR-like_helical_dom_sf	372	636

External Links

No external refs found!

SOLTUB.AGRIA.G00000022804

Expression Profile

Co-expression Networks

Functional Annotation