SOLTUB.AGRIA.G00000022908


Description : Tudor/PWWP/MBT superfamily protein


Gene families : OG_02_0015402 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022908
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000126 transcription factor TFIIIB complex IEP Predict GO terms from Neighborhoods
BP GO:0000278 mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0000429 carbon catabolite regulation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000436 carbon catabolite activation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000469 cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
CC GO:0000803 sex chromosome IEP Predict GO terms from Neighborhoods
MF GO:0000992 RNA polymerase III cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001006 RNA polymerase III type 3 promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001016 RNA polymerase III transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0001525 angiogenesis IEP Predict GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Predict GO terms from Neighborhoods
CC GO:0001741 XY body IEP Predict GO terms from Neighborhoods
BP GO:0001893 maternal placenta development IEP Predict GO terms from Neighborhoods
BP GO:0002084 protein depalmitoylation IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004520 endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004536 deoxyribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005662 DNA replication factor A complex IEP Predict GO terms from Neighborhoods
CC GO:0005703 polytene chromosome puff IEP Predict GO terms from Neighborhoods
CC GO:0005844 polysome IEP Predict GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006337 nucleosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006379 mRNA cleavage IEP Predict GO terms from Neighborhoods
BP GO:0006384 transcription initiation at RNA polymerase III promoter IEP Predict GO terms from Neighborhoods
BP GO:0006458 'de novo' protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007612 learning IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0008156 negative regulation of DNA replication IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008286 insulin receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008306 associative learning IEP Predict GO terms from Neighborhoods
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010171 body morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010172 embryonic body morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Predict GO terms from Neighborhoods
BP GO:0010453 regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010455 positive regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010634 positive regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016514 SWI/SNF complex IEP Predict GO terms from Neighborhoods
CC GO:0016586 RSC-type complex IEP Predict GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0030371 translation repressor activity IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Predict GO terms from Neighborhoods
MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031010 ISWI-type complex IEP Predict GO terms from Neighborhoods
BP GO:0031297 replication fork processing IEP Predict GO terms from Neighborhoods
CC GO:0031302 intrinsic component of endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0031493 obsolete nucleosomal histone binding IEP Predict GO terms from Neighborhoods
BP GO:0031494 regulation of mating type switching IEP Predict GO terms from Neighborhoods
BP GO:0031496 positive regulation of mating type switching IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033120 positive regulation of RNA splicing IEP Predict GO terms from Neighborhoods
MF GO:0034046 poly(G) binding IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
BP GO:0035601 protein deacylation IEP Predict GO terms from Neighborhoods
MF GO:0035613 RNA stem-loop binding IEP Predict GO terms from Neighborhoods
CC GO:0035861 site of double-strand break IEP Predict GO terms from Neighborhoods
BP GO:0035966 response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0036292 DNA rewinding IEP Predict GO terms from Neighborhoods
MF GO:0036310 ATP-dependent DNA/DNA annealing activity IEP Predict GO terms from Neighborhoods
BP GO:0042157 lipoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042159 lipoprotein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042177 negative regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042595 behavioral response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0042689 regulation of crystal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0042691 positive regulation of crystal cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0043005 neuron projection IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
BP GO:0045595 regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045597 positive regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045610 regulation of hemocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045612 positive regulation of hemocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045910 negative regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0045990 carbon catabolite regulation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0045991 carbon catabolite activation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0048026 positive regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048478 replication fork protection IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048864 stem cell development IEP Predict GO terms from Neighborhoods
BP GO:0050685 positive regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050807 regulation of synapse organization IEP Predict GO terms from Neighborhoods
MF GO:0051032 nucleic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0051033 RNA transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051084 'de novo' post-translational protein folding IEP Predict GO terms from Neighborhoods
BP GO:0051085 chaperone cofactor-dependent protein refolding IEP Predict GO terms from Neighborhoods
MF GO:0051087 chaperone binding IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051216 cartilage development IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051787 misfolded protein binding IEP Predict GO terms from Neighborhoods
BP GO:0051788 response to misfolded protein IEP Predict GO terms from Neighborhoods
CC GO:0055038 recycling endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0060135 maternal process involved in female pregnancy IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0070530 K63-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
MF GO:0070717 poly-purine tract binding IEP Predict GO terms from Neighborhoods
BP GO:0070897 transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Predict GO terms from Neighborhoods
BP GO:0071216 cellular response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071218 cellular response to misfolded protein IEP Predict GO terms from Neighborhoods
CC GO:0071564 npBAF complex IEP Predict GO terms from Neighborhoods
CC GO:0071565 nBAF complex IEP Predict GO terms from Neighborhoods
CC GO:0071683 sensory dendrite IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0072396 response to cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072402 response to DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072423 response to DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090329 regulation of DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0090576 RNA polymerase III transcription regulator complex IEP Predict GO terms from Neighborhoods
CC GO:0090734 site of DNA damage IEP Predict GO terms from Neighborhoods
MF GO:0098599 palmitoyl hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0098732 macromolecule deacylation IEP Predict GO terms from Neighborhoods
BP GO:0098734 macromolecule depalmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0098781 ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0098787 mRNA cleavage involved in mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0098789 pre-mRNA cleavage required for polyadenylation IEP Predict GO terms from Neighborhoods
CC GO:0098936 intrinsic component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0098948 intrinsic component of postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
CC GO:0098949 intrinsic component of postsynaptic endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0098951 intrinsic component of postsynaptic recycling endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099025 anchored component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099030 anchored component of postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
CC GO:0099031 anchored component of postsynaptic density membrane IEP Predict GO terms from Neighborhoods
CC GO:0099033 anchored component of postsynaptic recycling endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099034 anchored component of postsynaptic endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099144 anchored component of synaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099146 intrinsic component of postsynaptic density membrane IEP Predict GO terms from Neighborhoods
BP GO:0099175 regulation of postsynapse organization IEP Predict GO terms from Neighborhoods
CC GO:0099240 intrinsic component of synaptic membrane IEP Predict GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
MF GO:0140666 annealing activity IEP Predict GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902473 regulation of protein localization to synapse IEP Predict GO terms from Neighborhoods
BP GO:1902816 regulation of protein localization to microtubule IEP Predict GO terms from Neighborhoods
BP GO:1902817 negative regulation of protein localization to microtubule IEP Predict GO terms from Neighborhoods
BP GO:1902950 regulation of dendritic spine maintenance IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903684 regulation of border follicle cell migration IEP Predict GO terms from Neighborhoods
BP GO:1903688 positive regulation of border follicle cell migration IEP Predict GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:1905666 regulation of protein localization to endosome IEP Predict GO terms from Neighborhoods
BP GO:1905668 positive regulation of protein localization to endosome IEP Predict GO terms from Neighborhoods
CC GO:1990124 messenger ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:1990814 DNA/DNA annealing activity IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:2000243 positive regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000313 PWWP_dom 15 109
No external refs found!