SOLTUB.AGRIA.G00000022984


Description : Argonaute


Gene families : OG_02_0009671 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022984
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_118


Type GO Term Name Evidence Source
CC GO:0000791 euchromatin IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0004521 endoribonuclease activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006306 DNA methylation IEA AHRD
BP GO:0006417 regulation of translation IEA AHRD
BP GO:0007276 gamete generation IEA AHRD
BP GO:0009554 megasporogenesis IEA AHRD
BP GO:0010529 negative regulation of transposition IEA AHRD
BP GO:0010604 positive regulation of macromolecule metabolic process IEA AHRD
CC GO:0015030 Cajal body IEA AHRD
BP GO:0019048 modulation by virus of host process IEA AHRD
BP GO:0019827 stem cell population maintenance IEA AHRD
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEA AHRD
BP GO:0030422 siRNA processing IEA AHRD
BP GO:0031057 negative regulation of histone modification IEA AHRD
BP GO:0031325 positive regulation of cellular metabolic process IEA AHRD
MF GO:0035197 siRNA binding IEA AHRD
MF GO:0035198 miRNA binding IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
BP GO:0045087 innate immune response IEA AHRD
BP GO:0048481 plant ovule development IEA AHRD
BP GO:0050793 regulation of developmental process IEA AHRD
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEA AHRD
BP GO:0051567 histone H3-K9 methylation IEA AHRD
BP GO:0051607 defense response to virus IEA AHRD
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEA AHRD
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA AHRD
BP GO:0140013 meiotic nuclear division IEA AHRD
BP GO:1904159 megasporocyte differentiation IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
MF GO:0000822 inositol hexakisphosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0000963 mitochondrial RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000966 RNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0002064 epithelial cell development IEP Predict GO terms from Neighborhoods
BP GO:0002262 myeloid cell homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0003876 AMP deaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0004016 adenylate cyclase activity IEP Predict GO terms from Neighborhoods
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004697 protein kinase C activity IEP Predict GO terms from Neighborhoods
MF GO:0004698 calcium-dependent protein kinase C activity IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006144 purine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006178 guanine salvage IEP Predict GO terms from Neighborhoods
BP GO:0006188 IMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006195 purine nucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006196 AMP catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007584 response to nutrient IEP Predict GO terms from Neighborhoods
BP GO:0008361 regulation of cell size IEP Predict GO terms from Neighborhoods
BP GO:0009112 nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009113 purine nucleobase biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009125 nucleoside monophosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009128 purine nucleoside monophosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009134 nucleoside diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009137 purine nucleoside diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009154 purine ribonucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009158 ribonucleoside monophosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009166 nucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009169 purine ribonucleoside monophosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009181 purine ribonucleoside diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009187 cyclic nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009191 ribonucleoside diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009261 ribonucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009556 microsporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009755 hormone-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009873 ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0009931 calcium-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0009975 cyclase activity IEP Predict GO terms from Neighborhoods
MF GO:0010011 auxin binding IEP Predict GO terms from Neighborhoods
BP GO:0010152 pollen maturation IEP Predict GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Predict GO terms from Neighborhoods
BP GO:0010219 regulation of vernalization response IEP Predict GO terms from Neighborhoods
BP GO:0010220 positive regulation of vernalization response IEP Predict GO terms from Neighborhoods
BP GO:0010311 lateral root formation IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010467 gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
MF GO:0010857 calcium-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0016036 cellular response to phosphate starvation IEP Predict GO terms from Neighborhoods
BP GO:0016556 mRNA modification IEP Predict GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predict GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predict GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
BP GO:0018105 peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018209 peptidyl-serine modification IEP Predict GO terms from Neighborhoods
CC GO:0019005 SCF ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031301 integral component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031307 integral component of mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
CC GO:0031983 vesicle lumen IEP Predict GO terms from Neighborhoods
MF GO:0032036 myosin heavy chain binding IEP Predict GO terms from Neighborhoods
BP GO:0032261 purine nucleotide salvage IEP Predict GO terms from Neighborhoods
BP GO:0032264 IMP salvage IEP Predict GO terms from Neighborhoods
BP GO:0032350 regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032351 negative regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032535 regulation of cellular component size IEP Predict GO terms from Neighborhoods
CC GO:0032592 integral component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0034101 erythrocyte homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0034774 secretory granule lumen IEP Predict GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
MF GO:0038198 auxin receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0040034 regulation of development, heterochronic IEP Predict GO terms from Neighborhoods
MF GO:0042562 hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0042632 cholesterol homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Predict GO terms from Neighborhoods
BP GO:0043096 purine nucleobase salvage IEP Predict GO terms from Neighborhoods
BP GO:0043101 purine-containing compound salvage IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
BP GO:0043173 nucleotide salvage IEP Predict GO terms from Neighborhoods
MF GO:0043178 alcohol binding IEP Predict GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
MF GO:0043424 protein histidine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0045013 carbon catabolite repression of transcription IEP Predict GO terms from Neighborhoods
BP GO:0045014 carbon catabolite repression of transcription by glucose IEP Predict GO terms from Neighborhoods
BP GO:0045990 carbon catabolite regulation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0046015 regulation of transcription by glucose IEP Predict GO terms from Neighborhoods
BP GO:0046031 ADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046032 ADP catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046033 AMP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046039 GTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046040 IMP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046098 guanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046099 guanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046112 nucleobase biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046390 ribose phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047623 adenosine-phosphate deaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0048443 stamen development IEP Predict GO terms from Neighborhoods
BP GO:0048506 regulation of timing of meristematic phase transition IEP Predict GO terms from Neighborhoods
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Predict GO terms from Neighborhoods
BP GO:0048532 anatomical structure arrangement IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048653 anther development IEP Predict GO terms from Neighborhoods
BP GO:0048871 multicellular organismal homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0048872 homeostasis of number of cells IEP Predict GO terms from Neighborhoods
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0055088 lipid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055092 sterol homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0060205 cytoplasmic vesicle lumen IEP Predict GO terms from Neighborhoods
BP GO:0061984 catabolite repression IEP Predict GO terms from Neighborhoods
BP GO:0061985 carbon catabolite repression IEP Predict GO terms from Neighborhoods
BP GO:0061986 negative regulation of transcription by glucose IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071249 cellular response to nitrate IEP Predict GO terms from Neighborhoods
BP GO:0072015 podocyte development IEP Predict GO terms from Neighborhoods
BP GO:0072310 glomerular epithelial cell development IEP Predict GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072523 purine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
BP GO:0080092 regulation of pollen tube growth IEP Predict GO terms from Neighborhoods
BP GO:0080156 mitochondrial mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0090066 regulation of anatomical structure size IEP Predict GO terms from Neighborhoods
BP GO:0090354 regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090356 negative regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090615 mitochondrial mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0090617 mitochondrial mRNA 5'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0097009 energy homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0106380 purine ribonucleotide salvage IEP Predict GO terms from Neighborhoods
BP GO:0140053 mitochondrial gene expression IEP Predict GO terms from Neighborhoods
BP GO:1900864 mitochondrial RNA modification IEP Predict GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901292 nucleoside phosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902170 cellular response to reactive nitrogen species IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
BP GO:1905428 regulation of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:2000025 regulation of leaf formation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036085 PAZ_dom_sf 297 461
IPR014811 ArgoL1 252 300
IPR032474 Argonaute_N 75 240
IPR032472 ArgoL2 446 491
IPR003100 PAZ_dom 306 436
IPR003165 Piwi 590 896
IPR032473 Argonaute_Mid_dom 501 579
IPR012337 RNaseH-like_sf 573 895
No external refs found!