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  5. SOLTUB.AGRIA.G00000023059

SOLTUB.AGRIA.G00000023059


Description : Casparian strip membrane protein 1


Gene families : OG_02_0003960 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023059
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_174


Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0007043 cell-cell junction assembly IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
BP GO:0042545 cell wall modification IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
CC GO:0048226 Casparian strip IEA AHRD
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predict GO terms from Neighborhoods
MF GO:0000293 ferric-chelate reductase activity IEP Predict GO terms from Neighborhoods
CC GO:0000329 fungal-type vacuole membrane IEP Predict GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005342 organic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005372 water transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005381 iron ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005385 zinc ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005496 steroid binding IEP Predict GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006812 cation transport IEP Predict GO terms from Neighborhoods
BP GO:0006820 anion transport IEP Predict GO terms from Neighborhoods
BP GO:0006825 copper ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006826 iron ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006828 manganese ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006829 zinc ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006842 tricarboxylic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006873 cellular ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006875 cellular metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006878 cellular copper ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006879 cellular iron ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006880 intracellular sequestering of iron ion IEP Predict GO terms from Neighborhoods
BP GO:0007154 cell communication IEP Predict GO terms from Neighborhoods
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP Predict GO terms from Neighborhoods
MF GO:0008271 secondary active sulfate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008272 sulfate transport IEP Predict GO terms from Neighborhoods
MF GO:0008324 cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008509 anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008514 organic anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0009277 fungal-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009593 detection of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0009692 ethylene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009693 ethylene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009720 detection of hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009723 response to ethylene IEP Predict GO terms from Neighborhoods
BP GO:0009726 detection of endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009727 detection of ethylene stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009808 lignin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009809 lignin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009970 cellular response to sulfate starvation IEP Predict GO terms from Neighborhoods
BP GO:0009991 response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010030 positive regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010036 response to boron-containing substance IEP Predict GO terms from Neighborhoods
BP GO:0010039 response to iron ion IEP Predict GO terms from Neighborhoods
BP GO:0010266 response to vitamin B1 IEP Predict GO terms from Neighborhoods
BP GO:0010345 suberin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015075 ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015093 ferrous iron transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015105 arsenite transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015115 silicate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015116 sulfate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015129 lactate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015137 citrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015142 tricarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015166 polyol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015168 glycerol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015204 urea transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015250 water channel activity IEP Predict GO terms from Neighborhoods
MF GO:0015301 obsolete anion:anion antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015485 cholesterol binding IEP Predict GO terms from Neighborhoods
BP GO:0015679 plasma membrane copper ion transport IEP Predict GO terms from Neighborhoods
BP GO:0015698 inorganic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015700 arsenite transport IEP Predict GO terms from Neighborhoods
BP GO:0015708 silicic acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0015727 lactate transport IEP Predict GO terms from Neighborhoods
BP GO:0015746 citrate transport IEP Predict GO terms from Neighborhoods
BP GO:0015791 polyol transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015793 glycerol transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015840 urea transport IEP Predict GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Predict GO terms from Neighborhoods
CC GO:0016328 lateral plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016722 oxidoreductase activity, acting on metal ions IEP Predict GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019755 one-carbon compound transport IEP Predict GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Predict GO terms from Neighborhoods
BP GO:0030003 cellular cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030026 cellular manganese ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
CC GO:0030445 yeast-form cell wall IEP Predict GO terms from Neighborhoods
MF GO:0031320 hexitol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0031418 L-ascorbic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0031667 response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
MF GO:0032934 sterol binding IEP Predict GO terms from Neighborhoods
BP GO:0033212 iron import into cell IEP Predict GO terms from Neighborhoods
BP GO:0033214 siderophore-dependent iron import into cell IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
BP GO:0034220 ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034755 iron ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035434 copper ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0043449 cellular alkene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043450 alkene biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0043661 peribacteroid membrane IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0046029 mannitol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0046713 borate transport IEP Predict GO terms from Neighborhoods
MF GO:0046715 active borate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0046916 cellular transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Predict GO terms from Neighborhoods
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048658 anther wall tapetum development IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0050801 ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Predict GO terms from Neighborhoods
BP GO:0051238 sequestering of metal ion IEP Predict GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
MF GO:0052747 sinapyl alcohol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0055065 metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055070 copper ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055071 manganese ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055072 iron ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055076 transition metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055080 cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055082 cellular chemical homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071398 cellular response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0071421 manganese ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071577 zinc ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071731 response to nitric oxide IEP Predict GO terms from Neighborhoods
BP GO:0071732 cellular response to nitric oxide IEP Predict GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080027 response to herbivore IEP Predict GO terms from Neighborhoods
BP GO:0080029 cellular response to boron-containing substance levels IEP Predict GO terms from Neighborhoods
BP GO:0080170 hydrogen peroxide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0097577 sequestering of iron ion IEP Predict GO terms from Neighborhoods
BP GO:0098655 cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098657 import into cell IEP Predict GO terms from Neighborhoods
BP GO:0098658 inorganic anion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098661 inorganic anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098705 copper ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098739 import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0098852 lytic vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0099587 inorganic ion import across plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0102311 8-hydroxygeraniol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0120254 olefinic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0120255 olefinic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900036 positive regulation of cellular response to heat IEP Predict GO terms from Neighborhoods
BP GO:1900673 olefin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900674 olefin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901678 iron coordination entity transport IEP Predict GO terms from Neighborhoods
BP GO:1901698 response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1902170 cellular response to reactive nitrogen species IEP Predict GO terms from Neighborhoods
BP GO:1902358 sulfate transmembrane transport IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006459 CASP/CASPL 50 202
IPR006702 CASP_dom 43 190
No external refs found!