| CC | GO:0000118 | histone deacetylase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000217 | DNA secondary structure binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000710 | meiotic mismatch repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000712 | resolution of meiotic recombination intermediates | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000793 | condensed chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000794 | condensed nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0001401 | SAM complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001835 | blastocyst hatching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002244 | hematopoietic progenitor cell differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003680 | minor groove of adenine-thymine-rich DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004326 | tetrahydrofolylpolyglutamate synthase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005700 | polytene chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006277 | DNA amplification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006298 | mismatch repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006335 | DNA replication-dependent chromatin assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006349 | regulation of gene expression by genomic imprinting | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006839 | mitochondrial transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007006 | mitochondrial membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007008 | outer mitochondrial membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007140 | male meiotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007275 | multicellular organism development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007307 | eggshell chorion gene amplification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007379 | segment specification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008340 | determination of adult lifespan | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008841 | dihydrofolate synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009527 | plastid outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009707 | chloroplast outer membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009790 | embryo development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009853 | photorespiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009909 | regulation of flower development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009944 | polarity specification of adaxial/abaxial axis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010026 | trichome differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010044 | response to aluminum ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010073 | meristem maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010196 | nonphotochemical quenching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010272 | response to silver ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010479 | stele development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010777 | meiotic mismatch repair involved in reciprocal meiotic recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016571 | histone methylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016581 | NuRD complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016584 | obsolete nucleosome positioning | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016589 | NURF complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030097 | hemopoiesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030278 | regulation of ossification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030447 | filamentous growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030500 | regulation of bone mineralization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031010 | ISWI-type complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031017 | exocrine pancreas development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031099 | regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031100 | animal organ regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031101 | fin regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031145 | anaphase-promoting complex-dependent catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031445 | regulation of heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031491 | nucleosome binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031519 | PcG protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031523 | Myb complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032501 | multicellular organismal process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033186 | CAF-1 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034968 | histone lysine methylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035098 | ESC/E(Z) complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035188 | hatching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036123 | histone H3-K9 dimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040008 | regulation of growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040014 | regulation of multicellular organism growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042246 | tissue regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042754 | negative regulation of circadian rhythm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042766 | obsolete nucleosome mobilization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042826 | histone deacetylase binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043073 | germ cell nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044182 | filamentous growth of a population of unicellular organisms | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045036 | protein targeting to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045040 | protein insertion into mitochondrial outer membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045787 | positive regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045840 | positive regulation of mitotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045842 | positive regulation of mitotic metaphase/anaphase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046689 | response to mercury ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046898 | response to cycloheximide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048358 | mucilage pectin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048363 | mucilage pectin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048732 | gland development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048831 | regulation of shoot system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051026 | chiasma assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051204 | protein insertion into mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051512 | positive regulation of unidimensional cell growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051567 | histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051574 | positive regulation of histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051785 | positive regulation of nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060042 | retina morphogenesis in camera-type eye | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061647 | histone H3-K9 modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061982 | meiosis I cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070167 | regulation of biomineral tissue development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070180 | large ribosomal subunit rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070370 | cellular heat acclimation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070822 | Sin3-type complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070979 | protein K11-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071217 | cellular response to external biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071684 | organism emergence from protective structure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072596 | establishment of protein localization to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072598 | protein localization to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090058 | metaxylem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090151 | establishment of protein localization to mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090351 | seedling development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090545 | CHD-type complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097421 | liver regeneration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110149 | regulation of biomineralization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120261 | regulation of heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900112 | regulation of histone H3-K9 trimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900114 | positive regulation of histone H3-K9 trimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901970 | positive regulation of mitotic sister chromatid separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902066 | regulation of cell wall pectin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902101 | positive regulation of metaphase/anaphase transition of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902183 | regulation of shoot apical meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902275 | regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905820 | positive regulation of chromosome separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990066 | energy quenching | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990932 | 5.8S rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000024 | regulation of leaf development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000653 | regulation of genetic imprinting | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000772 | regulation of cellular senescence | IEP | Predict GO terms from Neighborhoods |