SOLTUB.AGRIA.G00000023518


Description : BIG SEEDS 1


Gene families : OG_02_0015536 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023518
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_126


Type GO Term Name Evidence Source
MF GO:0004722 protein serine/threonine phosphatase activity IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006470 protein dephosphorylation IEA AHRD
BP GO:0006950 response to stress IEA AHRD
BP GO:0009266 response to temperature stimulus IEA AHRD
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEA AHRD
BP GO:0010119 regulation of stomatal movement IEA AHRD
CC GO:0016020 membrane IEA AHRD
MF GO:0019900 kinase binding IEA AHRD
BP GO:0033262 regulation of nuclear cell cycle DNA replication IEA AHRD
BP GO:0048523 negative regulation of cellular process IEA AHRD
BP GO:0099402 plant organ development IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004535 poly(A)-specific ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 423 631
IPR018467 CCT_CS 238 256
IPR036457 PPM-type-like_dom_sf 385 633
IPR010399 Tify_dom 139 167
No external refs found!