Coexpression cluster: Cluster_126 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005747 mitochondrial respiratory chain complex I 7.46% (5/67) 5.63 0.0 2.7e-05
GO:0030964 NADH dehydrogenase complex 7.46% (5/67) 5.63 0.0 2.7e-05
GO:0045271 respiratory chain complex I 7.46% (5/67) 5.63 0.0 2.7e-05
GO:0098803 respiratory chain complex 7.46% (5/67) 4.93 1e-06 0.000236
GO:1902495 transmembrane transporter complex 7.46% (5/67) 4.7 1e-06 0.000406
GO:0101003 ficolin-1-rich granule membrane 4.48% (3/67) 6.77 3e-06 0.000607
GO:1990351 transporter complex 7.46% (5/67) 4.32 5e-06 0.001066
GO:0098800 inner mitochondrial membrane protein complex 7.46% (5/67) 4.22 8e-06 0.001329
GO:1990204 oxidoreductase complex 7.46% (5/67) 4.09 1.2e-05 0.001786
GO:1902494 catalytic complex 19.4% (13/67) 2.0 1.8e-05 0.002429
GO:0022904 respiratory electron transport chain 5.97% (4/67) 4.63 2.1e-05 0.00267
GO:2001160 regulation of histone H3-K79 methylation 2.99% (2/67) 7.6 4.3e-05 0.004562
GO:2001162 positive regulation of histone H3-K79 methylation 2.99% (2/67) 7.6 4.3e-05 0.004562
GO:0120034 positive regulation of plasma membrane bounded cell projection assembly 4.48% (3/67) 5.38 5.3e-05 0.005162
GO:0098798 mitochondrial protein-containing complex 7.46% (5/67) 3.59 6.2e-05 0.005638
GO:0019646 aerobic electron transport chain 4.48% (3/67) 4.94 0.000132 0.005834
GO:0008023 transcription elongation factor complex 4.48% (3/67) 4.94 0.000132 0.005834
GO:0008137 NADH dehydrogenase (ubiquinone) activity 4.48% (3/67) 5.25 6.9e-05 0.005943
GO:0005868 cytoplasmic dynein complex 2.99% (2/67) 6.87 0.000129 0.006107
GO:0030235 nitric-oxide synthase regulator activity 2.99% (2/67) 6.87 0.000129 0.006107
GO:0035071 salivary gland cell autophagic cell death 2.99% (2/67) 6.87 0.000129 0.006107
GO:0045019 negative regulation of nitric oxide biosynthetic process 2.99% (2/67) 6.87 0.000129 0.006107
GO:0045505 dynein intermediate chain binding 2.99% (2/67) 6.87 0.000129 0.006107
GO:0048315 conidium formation 2.99% (2/67) 6.87 0.000129 0.006107
GO:0051959 dynein light intermediate chain binding 2.99% (2/67) 6.87 0.000129 0.006107
GO:1904406 negative regulation of nitric oxide metabolic process 2.99% (2/67) 6.87 0.000129 0.006107
GO:0099111 microtubule-based transport 5.97% (4/67) 4.13 8.3e-05 0.006338
GO:0055087 Ski complex 2.99% (2/67) 7.19 8.1e-05 0.006497
GO:0034454 microtubule anchoring at centrosome 2.99% (2/67) 6.73 0.000158 0.006553
GO:0051017 actin filament bundle assembly 4.48% (3/67) 4.87 0.000154 0.006585
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 4.48% (3/67) 4.75 0.000195 0.006683
GO:0050136 NADH dehydrogenase (quinone) activity 4.48% (3/67) 4.75 0.000195 0.006683
GO:0007290 spermatid nucleus elongation 2.99% (2/67) 6.6 0.000189 0.006821
GO:0097731 9+0 non-motile cilium 2.99% (2/67) 6.6 0.000189 0.006821
GO:0016593 Cdc73/Paf1 complex 2.99% (2/67) 6.6 0.000189 0.006821
GO:0005929 cilium 5.97% (4/67) 3.85 0.000178 0.00697
GO:0008407 chaeta morphogenesis 2.99% (2/67) 7.02 0.000103 0.007092
GO:0031475 myosin V complex 2.99% (2/67) 7.02 0.000103 0.007092
GO:0034453 microtubule anchoring 2.99% (2/67) 6.49 0.000223 0.007116
GO:0072393 microtubule anchoring at microtubule organizing center 2.99% (2/67) 6.49 0.000223 0.007116
GO:0003954 NADH dehydrogenase activity 4.48% (3/67) 4.71 0.000213 0.007133
GO:0061572 actin filament bundle organization 4.48% (3/67) 4.8 0.000178 0.007166
GO:0060491 regulation of cell projection assembly 4.48% (3/67) 4.6 0.000264 0.007386
GO:0120032 regulation of plasma membrane bounded cell projection assembly 4.48% (3/67) 4.6 0.000264 0.007386
GO:0120025 plasma membrane bounded cell projection 13.43% (9/67) 2.1 0.000239 0.007467
GO:0033108 mitochondrial respiratory chain complex assembly 4.48% (3/67) 4.58 0.000275 0.007539
GO:0032991 protein-containing complex 29.85% (20/67) 1.27 0.000116 0.00757
GO:0035721 intraciliary retrograde transport 2.99% (2/67) 6.38 0.00026 0.007587
GO:0048102 autophagic cell death 2.99% (2/67) 6.38 0.00026 0.007587
GO:0097542 ciliary tip 2.99% (2/67) 6.38 0.00026 0.007587
GO:0030286 dynein complex 2.99% (2/67) 6.28 0.0003 0.008059
GO:0098796 membrane protein complex 10.45% (7/67) 2.42 0.000331 0.00873
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 4.48% (3/67) 4.47 0.000347 0.008977
GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus 2.99% (2/67) 6.1 0.000387 0.009485
GO:0045724 positive regulation of cilium assembly 2.99% (2/67) 6.1 0.000387 0.009485
GO:1902857 positive regulation of non-motile cilium assembly 2.99% (2/67) 6.1 0.000387 0.009485
GO:0042995 cell projection 13.43% (9/67) 1.98 0.000441 0.010614
GO:0030436 asexual sporulation 2.99% (2/67) 5.94 0.000486 0.010924
GO:0030473 nuclear migration along microtubule 2.99% (2/67) 5.94 0.000486 0.010924
GO:1904799 regulation of neuron remodeling 2.99% (2/67) 5.94 0.000486 0.010924
GO:1904801 positive regulation of neuron remodeling 2.99% (2/67) 5.94 0.000486 0.010924
GO:0009886 post-embryonic animal morphogenesis 4.48% (3/67) 4.23 0.000559 0.012378
GO:0000132 establishment of mitotic spindle orientation 2.99% (2/67) 5.73 0.000654 0.013391
GO:0042133 neurotransmitter metabolic process 2.99% (2/67) 5.73 0.000654 0.013391
GO:0044458 motile cilium assembly 2.99% (2/67) 5.73 0.000654 0.013391
GO:1904115 axon cytoplasm 2.99% (2/67) 5.73 0.000654 0.013391
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 2.99% (2/67) 5.73 0.000654 0.013391
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 4.48% (3/67) 4.12 0.000711 0.014353
GO:0007291 sperm individualization 2.99% (2/67) 5.6 0.00078 0.014652
GO:0014042 positive regulation of neuron maturation 2.99% (2/67) 5.6 0.00078 0.014652
GO:0045428 regulation of nitric oxide biosynthetic process 2.99% (2/67) 5.6 0.00078 0.014652
GO:0097110 scaffold protein binding 2.99% (2/67) 5.6 0.00078 0.014652
GO:0016461 unconventional myosin complex 2.99% (2/67) 5.54 0.000846 0.0147
GO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus 2.99% (2/67) 5.54 0.000846 0.0147
GO:1902855 regulation of non-motile cilium assembly 2.99% (2/67) 5.54 0.000846 0.0147
GO:0016093 polyprenol metabolic process 2.99% (2/67) 5.54 0.000846 0.0147
GO:0045638 negative regulation of myeloid cell differentiation 2.99% (2/67) 5.54 0.000846 0.0147
GO:0030667 secretory granule membrane 4.48% (3/67) 4.09 0.000753 0.014974
GO:0022900 electron transport chain 5.97% (4/67) 3.27 0.000809 0.015001
GO:0014041 regulation of neuron maturation 2.99% (2/67) 5.43 0.000988 0.016738
GO:0080182 histone H3-K4 trimethylation 2.99% (2/67) 5.43 0.000988 0.016738
GO:0005765 lysosomal membrane 4.48% (3/67) 3.94 0.00101 0.016904
GO:0042073 intraciliary transport 2.99% (2/67) 5.38 0.001063 0.017571
GO:0008180 COP9 signalosome 2.99% (2/67) 5.28 0.001221 0.019249
GO:0016459 myosin complex 2.99% (2/67) 5.28 0.001221 0.019249
GO:0040001 establishment of mitotic spindle localization 2.99% (2/67) 5.28 0.001221 0.019249
GO:0051294 establishment of spindle orientation 2.99% (2/67) 5.28 0.001221 0.019249
GO:0007476 imaginal disc-derived wing morphogenesis 2.99% (2/67) 5.23 0.001303 0.019868
GO:0120111 neuron projection cytoplasm 2.99% (2/67) 5.23 0.001303 0.019868
GO:1903431 positive regulation of cell maturation 2.99% (2/67) 5.23 0.001303 0.019868
GO:0032024 positive regulation of insulin secretion 2.99% (2/67) 5.19 0.001389 0.020709
GO:0035114 imaginal disc-derived appendage morphogenesis 2.99% (2/67) 5.19 0.001389 0.020709
GO:0009060 aerobic respiration 4.48% (3/67) 3.76 0.001442 0.021271
GO:1902017 regulation of cilium assembly 2.99% (2/67) 5.14 0.001477 0.021552
GO:0120031 plasma membrane bounded cell projection assembly 4.48% (3/67) 3.74 0.001507 0.021761
GO:0035120 post-embryonic appendage morphogenesis 2.99% (2/67) 5.1 0.001567 0.022398
GO:0005814 centriole 2.99% (2/67) 5.02 0.001756 0.022946
GO:0043935 sexual sporulation resulting in formation of a cellular spore 2.99% (2/67) 5.02 0.001756 0.022946
GO:1903429 regulation of cell maturation 2.99% (2/67) 5.02 0.001756 0.022946
GO:0031269 pseudopodium assembly 1.49% (1/67) 9.19 0.001714 0.023284
GO:0035268 protein mannosylation 1.49% (1/67) 9.19 0.001714 0.023284
GO:0035269 protein O-linked mannosylation 1.49% (1/67) 9.19 0.001714 0.023284
GO:0031258 lamellipodium membrane 1.49% (1/67) 9.19 0.001714 0.023284
GO:0006368 transcription elongation by RNA polymerase II promoter 2.99% (2/67) 5.06 0.00166 0.023484
GO:0030031 cell projection assembly 4.48% (3/67) 3.66 0.001749 0.02352
GO:0005930 axoneme 2.99% (2/67) 4.94 0.001955 0.024387
GO:0097730 non-motile cilium 2.99% (2/67) 4.94 0.001955 0.024387
GO:0030027 lamellipodium 2.99% (2/67) 4.94 0.001955 0.024387
GO:0018023 peptidyl-lysine trimethylation 2.99% (2/67) 4.94 0.001955 0.024387
GO:0045333 cellular respiration 4.48% (3/67) 3.59 0.002013 0.024885
GO:0005829 cytosol 28.36% (19/67) 0.99 0.00204 0.024991
GO:0007015 actin filament organization 4.48% (3/67) 3.61 0.001935 0.025049
GO:0051293 establishment of spindle localization 2.99% (2/67) 4.87 0.002165 0.026281
GO:0034399 nuclear periphery 2.99% (2/67) 4.83 0.002273 0.027356
GO:0032981 mitochondrial respiratory chain complex I assembly 2.99% (2/67) 4.8 0.002384 0.028443
GO:0002793 positive regulation of peptide secretion 2.99% (2/67) 4.76 0.002498 0.02904
GO:0090277 positive regulation of peptide hormone secretion 2.99% (2/67) 4.76 0.002498 0.02904
GO:0008022 protein C-terminus binding 4.48% (3/67) 3.49 0.002477 0.029302
GO:0005643 nuclear pore 2.99% (2/67) 4.73 0.002614 0.029636
GO:0031514 motile cilium 2.99% (2/67) 4.73 0.002614 0.029636
GO:0051653 spindle localization 2.99% (2/67) 4.73 0.002614 0.029636
GO:0032838 plasma membrane bounded cell projection cytoplasm 2.99% (2/67) 4.7 0.002732 0.030726
GO:0046887 positive regulation of hormone secretion 2.99% (2/67) 4.63 0.002977 0.033204
GO:0009055 electron transfer activity 4.48% (3/67) 3.39 0.003003 0.033224
GO:0050796 regulation of insulin secretion 2.99% (2/67) 4.6 0.003103 0.033258
GO:1902117 positive regulation of organelle assembly 2.99% (2/67) 4.6 0.003103 0.033258
GO:0010257 NADH dehydrogenase complex assembly 2.99% (2/67) 4.6 0.003103 0.033258
GO:0051571 positive regulation of histone H3-K4 methylation 2.99% (2/67) 4.6 0.003103 0.033258
GO:0000753 cell morphogenesis involved in conjugation with cellular fusion 1.49% (1/67) 8.19 0.003425 0.03333
GO:0016601 Rac protein signal transduction 1.49% (1/67) 8.19 0.003425 0.03333
GO:1990809 endoplasmic reticulum tubular network membrane organization 1.49% (1/67) 8.19 0.003425 0.03333
GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity 1.49% (1/67) 8.19 0.003425 0.03333
GO:0033185 dolichol-phosphate-mannose synthase complex 1.49% (1/67) 8.19 0.003425 0.03333
GO:0052668 CTP:farnesol kinase activity 1.49% (1/67) 8.19 0.003425 0.03333
GO:0052670 geraniol kinase activity 1.49% (1/67) 8.19 0.003425 0.03333
GO:0052671 geranylgeraniol kinase activity 1.49% (1/67) 8.19 0.003425 0.03333
GO:0052673 prenol kinase activity 1.49% (1/67) 8.19 0.003425 0.03333
GO:0007488 histoblast morphogenesis 1.49% (1/67) 8.19 0.003425 0.03333
GO:0009057 macromolecule catabolic process 11.94% (8/67) 1.67 0.00352 0.03354
GO:0015399 primary active transmembrane transporter activity 5.97% (4/67) 2.69 0.003505 0.033624
GO:0097718 disordered domain specific binding 2.99% (2/67) 4.52 0.003496 0.033774
GO:0006354 DNA-templated transcription elongation 2.99% (2/67) 4.57 0.003231 0.034366
GO:0007349 cellularization 2.99% (2/67) 4.54 0.003362 0.035213
GO:0080164 regulation of nitric oxide metabolic process 2.99% (2/67) 4.54 0.003362 0.035213
GO:0140513 nuclear protein-containing complex 11.94% (8/67) 1.65 0.003836 0.036292
GO:0016651 oxidoreductase activity, acting on NAD(P)H 4.48% (3/67) 3.26 0.003881 0.036473
GO:0010638 positive regulation of organelle organization 5.97% (4/67) 2.62 0.004162 0.038847
GO:0015980 energy derivation by oxidation of organic compounds 4.48% (3/67) 3.2 0.00431 0.039952
GO:0051568 histone H3-K4 methylation 2.99% (2/67) 4.36 0.004347 0.040025
GO:0031346 positive regulation of cell projection organization 4.48% (3/67) 3.18 0.004502 0.040904
GO:0045292 mRNA cis splicing, via spliceosome 2.99% (2/67) 4.33 0.004497 0.041133
GO:0050714 positive regulation of protein secretion 2.99% (2/67) 4.28 0.004805 0.043369
GO:0044317 rod spherule 1.49% (1/67) 7.6 0.005134 0.043477
GO:0031501 mannosyltransferase complex 1.49% (1/67) 7.6 0.005134 0.043477
GO:0010276 phytol kinase activity 1.49% (1/67) 7.6 0.005134 0.043477
GO:0032361 pyridoxal phosphate catabolic process 1.49% (1/67) 7.6 0.005134 0.043477
GO:0015234 thiamine transmembrane transporter activity 1.49% (1/67) 7.6 0.005134 0.043477
GO:0015888 thiamine transport 1.49% (1/67) 7.6 0.005134 0.043477
GO:0030974 thiamine pyrophosphate transmembrane transport 1.49% (1/67) 7.6 0.005134 0.043477
GO:0071934 thiamine transmembrane transport 1.49% (1/67) 7.6 0.005134 0.043477
GO:0090422 thiamine pyrophosphate transmembrane transporter activity 1.49% (1/67) 7.6 0.005134 0.043477
GO:0002791 regulation of peptide secretion 2.99% (2/67) 4.21 0.005284 0.043937
GO:0072384 organelle transport along microtubule 2.99% (2/67) 4.21 0.005284 0.043937
GO:0090276 regulation of peptide hormone secretion 2.99% (2/67) 4.21 0.005284 0.043937
GO:0035107 appendage morphogenesis 2.99% (2/67) 4.19 0.005448 0.045032
GO:0098852 lytic vacuole membrane 4.48% (3/67) 3.12 0.005109 0.045813
GO:0060562 epithelial tube morphogenesis 2.99% (2/67) 4.17 0.005615 0.046132
GO:0007097 nuclear migration 2.99% (2/67) 4.1 0.00613 0.049469
GO:0019954 asexual reproduction 2.99% (2/67) 4.1 0.00613 0.049469
GO:0051301 cell division 7.46% (5/67) 2.11 0.006059 0.049479
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_174 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_202 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_212 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_222 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_237 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_252 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_31 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_69 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_119 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms