SOLTUB.AGRIA.G00000023626

Description : Integral membrane HRF1 family protein

Gene families : OG_02_0015558 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023626
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_67

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEA	AHRD
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
BP	GO:0001578	microtubule bundle formation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	IEA	AHRD
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	AHRD
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007288	sperm axoneme assembly	IEA	AHRD
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	IEA	AHRD
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035082	axoneme assembly	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000018	regulation of DNA recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0000041	transition metal ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0000153	cytoplasmic ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000325	plant-type vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0003013	circulatory system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003018	vascular process in circulatory system	IEP	Predict GO terms from Neighborhoods
MF	GO:0004540	ribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005310	dicarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005622	intracellular anatomical structure	IEP	Predict GO terms from Neighborhoods
CC	GO:0005938	cell cortex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006513	protein monoubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006805	xenobiotic metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006835	dicarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006855	xenobiotic transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006954	inflammatory response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007565	female pregnancy	IEP	Predict GO terms from Neighborhoods
MF	GO:0008281	sulfonylurea receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008559	ABC-type xenobiotic transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009790	embryo development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Predict GO terms from Neighborhoods
CC	GO:0009925	basal plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009986	cell surface	IEP	Predict GO terms from Neighborhoods
BP	GO:0010232	vascular transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0010290	chlorophyll catabolite transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015127	bilirubin transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015431	ABC-type glutathione S-conjugate transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015694	mercury ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015718	monocarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015721	bile acid and bile salt transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015722	canalicular bile acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015723	bilirubin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015732	prostaglandin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015850	organic hydroxy compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015914	phospholipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016134	saponin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016135	saponin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016138	glycoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016999	antibiotic metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0019904	protein domain specific binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030002	cellular anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030007	cellular potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030320	cellular monovalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030587	sorocarp development	IEP	Predict GO terms from Neighborhoods
BP	GO:0030644	cellular chloride ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030653	beta-lactam antibiotic metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031253	cell projection membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031427	response to methotrexate	IEP	Predict GO terms from Neighborhoods
CC	GO:0031526	brush border membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031960	response to corticosteroid	IEP	Predict GO terms from Neighborhoods
BP	GO:0032355	response to estradiol	IEP	Predict GO terms from Neighborhoods
BP	GO:0032496	response to lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0032870	cellular response to hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0033762	response to glucagon	IEP	Predict GO terms from Neighborhoods
BP	GO:0034612	response to tumor necrosis factor	IEP	Predict GO terms from Neighborhoods
BP	GO:0038183	bile acid signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0042178	xenobiotic catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042316	penicillin metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042908	xenobiotic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0043223	cytoplasmic SCF ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0043434	response to peptide hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0043627	response to estrogen	IEP	Predict GO terms from Neighborhoods
BP	GO:0044070	regulation of anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0044106	cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044703	multi-organism reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044706	multi-multicellular organism process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045910	negative regulation of DNA recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0046618	xenobiotic export from cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0046685	response to arsenic-containing substance	IEP	Predict GO terms from Neighborhoods
CC	GO:0046691	intracellular canaliculus	IEP	Predict GO terms from Neighborhoods
BP	GO:0048545	response to steroid hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051384	response to glucocorticoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0055064	chloride ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055075	potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055081	anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055083	monovalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0070327	thyroid hormone transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070555	response to interleukin-1	IEP	Predict GO terms from Neighborhoods
BP	GO:0070633	transepithelial transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070741	response to interleukin-6	IEP	Predict GO terms from Neighborhoods
BP	GO:0071216	cellular response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0071222	cellular response to lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0071310	cellular response to organic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071347	cellular response to interleukin-1	IEP	Predict GO terms from Neighborhoods
BP	GO:0071354	cellular response to interleukin-6	IEP	Predict GO terms from Neighborhoods
BP	GO:0071356	cellular response to tumor necrosis factor	IEP	Predict GO terms from Neighborhoods
BP	GO:0071383	cellular response to steroid hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071384	cellular response to corticosteroid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071385	cellular response to glucocorticoid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071548	response to dexamethasone	IEP	Predict GO terms from Neighborhoods
BP	GO:0071549	cellular response to dexamethasone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071715	icosanoid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071716	leukotriene transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0071987	WD40-repeat domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072338	cellular lactam metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097327	response to antineoplastic agent	IEP	Predict GO terms from Neighborhoods
MF	GO:0097602	cullin family protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0099120	socially cooperative development	IEP	Predict GO terms from Neighborhoods
BP	GO:0120188	regulation of bile acid secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0140115	export across plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0150104	transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods
BP	GO:1901086	benzylpenicillin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901527	abscisic acid-activated signaling pathway involved in stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:1901654	response to ketone	IEP	Predict GO terms from Neighborhoods
BP	GO:1901655	cellular response to ketone	IEP	Predict GO terms from Neighborhoods
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1904486	response to 17alpha-ethynylestradiol	IEP	Predict GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1990444	F-box domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1990962	xenobiotic transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005578	Yif1_fam	43	264

External Links

No external refs found!

SOLTUB.AGRIA.G00000023626

Expression Profile

Co-expression Networks

Functional Annotation