SOLTUB.AGRIA.G00000023702


Description : Ring finger protein, putative


Gene families : OG_02_0015575 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023702
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_218


Type GO Term Name Evidence Source
BP GO:0002238 response to molecule of fungal origin IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:0009617 response to bacterium IEA AHRD
BP GO:0009793 embryo development ending in seed dormancy IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
MF GO:0031625 ubiquitin protein ligase binding IEA AHRD
BP GO:0043068 positive regulation of programmed cell death IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0050832 defense response to fungus IEA AHRD
BP GO:0051865 protein autoubiquitination IEA AHRD
MF GO:0061630 ubiquitin protein ligase activity IEA AHRD
BP GO:0080167 response to karrikin IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000076 DNA replication checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000162 tryptophan biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0000794 condensed nuclear chromosome IEP Predict GO terms from Neighborhoods
BP GO:0000902 cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0000904 cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
MF GO:0000976 transcription cis-regulatory region binding IEP Predict GO terms from Neighborhoods
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Predict GO terms from Neighborhoods
CC GO:0001673 male germ cell nucleus IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005457 GDP-fucose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006690 icosanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006723 cuticle hydrocarbon biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006808 regulation of nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
MF GO:0008514 organic anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predict GO terms from Neighborhoods
BP GO:0009267 cellular response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0009423 chorismate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
CC GO:0009531 secondary cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009625 response to insect IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009819 drought recovery IEP Predict GO terms from Neighborhoods
BP GO:0009825 multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009828 plant-type cell wall loosening IEP Predict GO terms from Neighborhoods
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009909 regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0009933 meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010029 regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010074 maintenance of meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010091 trichome branching IEP Predict GO terms from Neighborhoods
BP GO:0010100 negative regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010222 stem vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010254 nectary development IEP Predict GO terms from Neighborhoods
BP GO:0010345 suberin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010438 cellular response to sulfur starvation IEP Predict GO terms from Neighborhoods
BP GO:0010450 inflorescence meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010469 regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010597 green leaf volatile biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015245 fatty acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015783 GDP-fucose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015786 UDP-glucose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015908 fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:0016049 cell growth IEP Predict GO terms from Neighborhoods
CC GO:0016605 PML body IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019372 lipoxygenase pathway IEP Predict GO terms from Neighborhoods
BP GO:0030174 regulation of DNA-templated DNA replication initiation IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0030912 response to deep water IEP Predict GO terms from Neighborhoods
BP GO:0031221 arabinan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031222 arabinan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031930 mitochondria-nucleus signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0032870 cellular response to hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0033135 regulation of peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0033138 positive regulation of peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0033206 meiotic cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
BP GO:0034502 protein localization to chromosome IEP Predict GO terms from Neighborhoods
BP GO:0035017 cuticle pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0035561 regulation of chromatin binding IEP Predict GO terms from Neighborhoods
BP GO:0035563 positive regulation of chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0040007 growth IEP Predict GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0042594 response to starvation IEP Predict GO terms from Neighborhoods
CC GO:0043073 germ cell nucleus IEP Predict GO terms from Neighborhoods
BP GO:0043476 pigment accumulation IEP Predict GO terms from Neighborhoods
BP GO:0043478 pigment accumulation in response to UV light IEP Predict GO terms from Neighborhoods
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Predict GO terms from Neighborhoods
BP GO:0043480 pigment accumulation in tissues IEP Predict GO terms from Neighborhoods
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Predict GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0044347 cell wall polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044403 biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045493 xylan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045595 regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045834 positive regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0046219 indolalkylamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046417 chorismate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0046889 positive regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046890 regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0048226 Casparian strip IEP Predict GO terms from Neighborhoods
BP GO:0048366 leaf development IEP Predict GO terms from Neighborhoods
BP GO:0048479 style development IEP Predict GO terms from Neighborhoods
BP GO:0048497 maintenance of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048580 regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048581 negative regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048638 regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048831 regulation of shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0050793 regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051093 negative regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051098 regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051099 positive regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051365 cellular response to potassium ion starvation IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061062 regulation of nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071163 DNA replication preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0071165 GINS complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0071168 protein localization to chromatin IEP Predict GO terms from Neighborhoods
BP GO:0071310 cellular response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0071365 cellular response to auxin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071495 cellular response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072334 UDP-galactose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0080050 regulation of seed development IEP Predict GO terms from Neighborhoods
BP GO:0080051 cutin transport IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080091 regulation of raffinose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080172 petal epidermis patterning IEP Predict GO terms from Neighborhoods
BP GO:0090378 seed trichome elongation IEP Predict GO terms from Neighborhoods
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0090700 maintenance of plant organ identity IEP Predict GO terms from Neighborhoods
BP GO:0090706 specification of plant organ position IEP Predict GO terms from Neighborhoods
BP GO:0090708 specification of plant organ axis polarity IEP Predict GO terms from Neighborhoods
BP GO:0097501 stress response to metal ion IEP Predict GO terms from Neighborhoods
MF GO:0097599 xylanase activity IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0120251 hydrocarbon biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0120252 hydrocarbon metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Predict GO terms from Neighborhoods
BP GO:1900032 regulation of trichome patterning IEP Predict GO terms from Neighborhoods
BP GO:1900033 negative regulation of trichome patterning IEP Predict GO terms from Neighborhoods
BP GO:1900384 regulation of flavonol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900386 positive regulation of flavonol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901332 negative regulation of lateral root development IEP Predict GO terms from Neighborhoods
BP GO:1901957 regulation of cutin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903224 regulation of endodermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1904276 regulation of wax biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904278 positive regulation of wax biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904424 regulation of GTP binding IEP Predict GO terms from Neighborhoods
BP GO:1904426 positive regulation of GTP binding IEP Predict GO terms from Neighborhoods
BP GO:1905097 regulation of guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
BP GO:1905099 positive regulation of guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
BP GO:1905255 regulation of RNA binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:1905614 negative regulation of developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:1905622 negative regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:1990359 stress response to zinc ion IEP Predict GO terms from Neighborhoods
BP GO:1990532 stress response to nickel ion IEP Predict GO terms from Neighborhoods
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000023 regulation of lateral root development IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000026 regulation of multicellular organismal development IEP Predict GO terms from Neighborhoods
BP GO:2000033 regulation of seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:2000034 regulation of seed maturation IEP Predict GO terms from Neighborhoods
BP GO:2000067 regulation of root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000069 regulation of post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:2000070 regulation of response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000273 positive regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
BP GO:2000603 regulation of secondary growth IEP Predict GO terms from Neighborhoods
BP GO:2000605 positive regulation of secondary growth IEP Predict GO terms from Neighborhoods
BP GO:2000895 hemicellulose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001108 positive regulation of Rho guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 160
No external refs found!