SOLTUB.AGRIA.G00000023886

Description : Defensin protein

Gene families : OG_02_0002597 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023886
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_15

Type	GO Term	Name	Evidence	Source
BP	GO:0001906	cell killing	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005615	extracellular space	IEA	AHRD
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0031640	killing of cells of another organism	IEA	AHRD
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0046870	cadmium ion binding	IEA	AHRD
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055073	cadmium ion homeostasis	IEA	AHRD
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0072507	divalent inorganic cation homeostasis	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000418	RNA polymerase IV complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000419	RNA polymerase V complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000785	chromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0000792	heterochromatin	IEP	Predict GO terms from Neighborhoods
MF	GO:0001882	nucleoside binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004620	phospholipase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005665	RNA polymerase II, core complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006304	DNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0006305	DNA alkylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006306	DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
MF	GO:0016298	lipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0032549	ribonucleoside binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043414	macromolecule methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044728	DNA methylation or demethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0047372	acylglycerol lipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0070918	small regulatory ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Predict GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036574	Scorpion_toxin-like_sf	30	76

External Links

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SOLTUB.AGRIA.G00000023886

Expression Profile

Co-expression Networks

Functional Annotation