SOLTUB.AGRIA.G00000023887

Description : Defensin protein

Gene families : OG_02_0002597 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023887
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_159

Type	GO Term	Name	Evidence	Source
BP	GO:0001906	cell killing	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005615	extracellular space	IEA	AHRD
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0031640	killing of cells of another organism	IEA	AHRD
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0046870	cadmium ion binding	IEA	AHRD
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055073	cadmium ion homeostasis	IEA	AHRD
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0072507	divalent inorganic cation homeostasis	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001046	core promoter sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0003002	regionalization	IEP	Predict GO terms from Neighborhoods
BP	GO:0003006	developmental process involved in reproduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003690	double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0007389	pattern specification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008300	isoprenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008356	asymmetric cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0009251	glucan catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009299	mRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009416	response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009581	detection of external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009582	detection of abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009590	detection of gravity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009639	response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009648	photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009653	anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009685	gibberellin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009799	specification of symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009888	tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009939	positive regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009954	proximal/distal pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009959	negative gravitropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009965	leaf morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010026	trichome differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010031	circumnutation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010154	fruit development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010162	seed dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IEP	Predict GO terms from Neighborhoods
BP	GO:0010218	response to far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010336	gibberellic acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010371	regulation of gibberellin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010411	xyloglucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010431	seed maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010444	guard mother cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010600	regulation of auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010601	positive regulation of auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016103	diterpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016115	terpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predict GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022611	dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030243	cellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030856	regulation of epithelial cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032350	regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032352	positive regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033946	xyloglucan-specific endo-beta-1,4-glucanase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044042	glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045487	gibberellin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045604	regulation of epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045682	regulation of epidermis development	IEP	Predict GO terms from Neighborhoods
BP	GO:0045892	negative regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046886	positive regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048317	seed morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048437	floral organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048441	petal development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048444	floral organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048571	long-day photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0048572	short-day photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0048573	photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048574	long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048575	short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048609	multicellular organismal reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048657	anther wall tapetum cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048832	specification of plant organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048833	specification of floral organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048834	specification of petal number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048856	anatomical structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048859	formation of anatomical boundary	IEP	Predict GO terms from Neighborhoods
BP	GO:0050879	multicellular organismal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051273	beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052736	beta-glucanase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0065001	specification of axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080050	regulation of seed development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080086	stamen filament development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090354	regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090355	positive regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090691	formation of plant organ boundary	IEP	Predict GO terms from Neighborhoods
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0099402	plant organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1905177	tracheary element differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905392	plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000038	regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000122	negative regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000904	regulation of starch metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036574	Scorpion_toxin-like_sf	14	60

External Links

No external refs found!

SOLTUB.AGRIA.G00000023887

Expression Profile

Co-expression Networks

Functional Annotation