Coexpression cluster: Cluster_159 (HCCA Clusters (HRR 50 & PCC 0.5))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0060255 regulation of macromolecule metabolic process 39.84% (49/123) 1.33 0.0 0.0
GO:0010468 regulation of gene expression 35.77% (44/123) 1.48 0.0 0.0
GO:1901363 heterocyclic compound binding 51.22% (63/123) 1.05 0.0 0.0
GO:0097159 organic cyclic compound binding 51.22% (63/123) 1.04 0.0 0.0
GO:0009299 mRNA transcription 4.88% (6/123) 5.9 0.0 0.0
GO:0090698 post-embryonic plant morphogenesis 12.2% (15/123) 2.94 0.0 0.0
GO:0003676 nucleic acid binding 36.59% (45/123) 1.33 0.0 0.0
GO:0010556 regulation of macromolecule biosynthetic process 30.08% (37/123) 1.5 0.0 1e-06
GO:0003746 translation elongation factor activity 4.88% (6/123) 5.5 0.0 1e-06
GO:0019222 regulation of metabolic process 42.28% (52/123) 1.14 0.0 1e-06
GO:0048834 specification of petal number 3.25% (4/123) 7.14 0.0 2e-06
GO:0003924 GTPase activity 8.13% (10/123) 3.54 0.0 3e-06
GO:0043170 macromolecule metabolic process 44.72% (55/123) 1.0 0.0 6e-06
GO:0065007 biological regulation 60.98% (75/123) 0.73 0.0 6e-06
GO:0008135 translation factor activity, RNA binding 6.5% (8/123) 4.01 0.0 6e-06
GO:0009889 regulation of biosynthetic process 31.71% (39/123) 1.31 0.0 6e-06
GO:0005488 binding 73.98% (91/123) 0.56 0.0 7e-06
GO:0031326 regulation of cellular biosynthetic process 30.89% (38/123) 1.32 0.0 7e-06
GO:0005515 protein binding 61.79% (76/123) 0.71 0.0 8e-06
GO:0080090 regulation of primary metabolic process 34.96% (43/123) 1.17 0.0 1e-05
GO:0050794 regulation of cellular process 52.03% (64/123) 0.83 0.0 1e-05
GO:0051171 regulation of nitrogen compound metabolic process 33.33% (41/123) 1.2 0.0 1.2e-05
GO:0034235 GPI anchor binding 2.44% (3/123) 7.9 0.0 1.2e-05
GO:0048859 formation of anatomical boundary 5.69% (7/123) 4.17 0.0 1.2e-05
GO:0032561 guanyl ribonucleotide binding 8.13% (10/123) 3.23 0.0 1.3e-05
GO:0019001 guanyl nucleotide binding 8.13% (10/123) 3.22 0.0 1.3e-05
GO:0090691 formation of plant organ boundary 5.69% (7/123) 4.2 0.0 1.3e-05
GO:0050789 regulation of biological process 56.1% (69/123) 0.74 0.0 1.8e-05
GO:0097367 carbohydrate derivative binding 21.14% (26/123) 1.62 0.0 1.8e-05
GO:0003923 GPI-anchor transamidase activity 2.44% (3/123) 7.57 0.0 1.9e-05
GO:0008303 caspase complex 2.44% (3/123) 7.57 0.0 1.9e-05
GO:0016255 attachment of GPI anchor to protein 2.44% (3/123) 7.57 0.0 1.9e-05
GO:0042765 GPI-anchor transamidase complex 2.44% (3/123) 7.57 0.0 1.9e-05
GO:0016070 RNA metabolic process 19.51% (24/123) 1.71 0.0 1.9e-05
GO:0043228 non-membrane-bounded organelle 24.39% (30/123) 1.47 0.0 1.9e-05
GO:0043232 intracellular non-membrane-bounded organelle 24.39% (30/123) 1.47 0.0 1.9e-05
GO:0043229 intracellular organelle 62.6% (77/123) 0.65 0.0 1.9e-05
GO:0045182 translation regulator activity 7.32% (9/123) 3.35 0.0 2e-05
GO:0090079 translation regulator activity, nucleic acid binding 6.5% (8/123) 3.65 0.0 2e-05
GO:0005575 cellular_component 82.11% (101/123) 0.43 0.0 2.1e-05
GO:0031323 regulation of cellular metabolic process 34.96% (43/123) 1.1 0.0 2.1e-05
GO:0043226 organelle 62.6% (77/123) 0.64 0.0 2.3e-05
GO:0017111 ribonucleoside triphosphate phosphatase activity 8.13% (10/123) 3.0 1e-06 3e-05
GO:0009506 plasmodesma 21.95% (27/123) 1.49 1e-06 4.1e-05
GO:0110165 cellular anatomical entity 80.49% (99/123) 0.42 1e-06 5.9e-05
GO:0003723 RNA binding 19.51% (24/123) 1.59 1e-06 5.9e-05
GO:0005911 cell-cell junction 21.95% (27/123) 1.45 1e-06 6.2e-05
GO:0070161 anchoring junction 21.95% (27/123) 1.44 1e-06 7.1e-05
GO:0009059 macromolecule biosynthetic process 14.63% (18/123) 1.9 2e-06 7.3e-05
GO:0048441 petal development 4.07% (5/123) 4.68 2e-06 7.4e-05
GO:0048519 negative regulation of biological process 32.52% (40/123) 1.08 2e-06 7.4e-05
GO:0090304 nucleic acid metabolic process 21.95% (27/123) 1.41 2e-06 9.7e-05
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 14.63% (18/123) 1.86 2e-06 9.8e-05
GO:0010218 response to far red light 5.69% (7/123) 3.57 2e-06 0.0001
GO:0010199 organ boundary specification between lateral organs and the meristem 4.07% (5/123) 4.57 2e-06 0.000101
GO:0051253 negative regulation of RNA metabolic process 13.82% (17/123) 1.92 3e-06 0.000112
GO:0051861 glycolipid binding 2.44% (3/123) 6.57 4e-06 0.000148
GO:0006351 DNA-templated transcription 5.69% (7/123) 3.44 4e-06 0.00017
GO:0019219 regulation of nucleobase-containing compound metabolic process 25.2% (31/123) 1.23 5e-06 0.000189
GO:0097659 nucleic acid-templated transcription 5.69% (7/123) 3.41 5e-06 0.000189
GO:0016462 pyrophosphatase activity 8.13% (10/123) 2.66 5e-06 0.00019
GO:0003674 molecular_function 78.86% (97/123) 0.4 5e-06 0.0002
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 8.13% (10/123) 2.64 5e-06 0.000201
GO:0030054 cell junction 22.76% (28/123) 1.3 6e-06 0.000236
GO:0005525 GTP binding 6.5% (8/123) 3.04 7e-06 0.000237
GO:0006414 translational elongation 4.07% (5/123) 4.24 7e-06 0.000257
GO:0016817 hydrolase activity, acting on acid anhydrides 8.13% (10/123) 2.58 7e-06 0.000259
GO:0051252 regulation of RNA metabolic process 23.58% (29/123) 1.25 8e-06 0.000265
GO:0010605 negative regulation of macromolecule metabolic process 19.51% (24/123) 1.42 8e-06 0.000271
GO:0009987 cellular process 71.54% (88/123) 0.45 9e-06 0.000312
GO:0010077 maintenance of inflorescence meristem identity 3.25% (4/123) 4.92 1e-05 0.000316
GO:0032991 protein-containing complex 26.83% (33/123) 1.12 1.1e-05 0.000351
GO:0048457 floral whorl morphogenesis 2.44% (3/123) 6.09 1.1e-05 0.000353
GO:0006139 nucleobase-containing compound metabolic process 23.58% (29/123) 1.22 1.1e-05 0.000354
GO:0048518 positive regulation of biological process 33.33% (41/123) 0.95 1.2e-05 0.000368
GO:0045892 negative regulation of DNA-templated transcription 12.2% (15/123) 1.9 1.2e-05 0.000369
GO:0009639 response to red or far red light 8.94% (11/123) 2.34 1.2e-05 0.000369
GO:1905392 plant organ morphogenesis 9.76% (12/123) 2.21 1.2e-05 0.00037
GO:0031324 negative regulation of cellular metabolic process 17.07% (21/123) 1.52 1.2e-05 0.000372
GO:0048856 anatomical structure development 36.59% (45/123) 0.87 1.3e-05 0.000387
GO:1902679 negative regulation of RNA biosynthetic process 12.2% (15/123) 1.89 1.3e-05 0.000389
GO:1903507 negative regulation of nucleic acid-templated transcription 12.2% (15/123) 1.89 1.3e-05 0.000389
GO:0032553 ribonucleotide binding 17.89% (22/123) 1.46 1.4e-05 0.0004
GO:0009892 negative regulation of metabolic process 20.33% (25/123) 1.33 1.4e-05 0.000404
GO:0010074 maintenance of meristem identity 7.32% (9/123) 2.65 1.5e-05 0.000417
GO:0019827 stem cell population maintenance 8.13% (10/123) 2.46 1.6e-05 0.000427
GO:0098727 maintenance of cell number 8.13% (10/123) 2.44 1.8e-05 0.000474
GO:0005840 ribosome 7.32% (9/123) 2.61 1.8e-05 0.000486
GO:0010201 response to continuous far red light stimulus by the high-irradiance response system 2.44% (3/123) 5.81 2e-05 0.000524
GO:0003729 mRNA binding 13.82% (17/123) 1.69 2e-05 0.000525
GO:0006396 RNA processing 13.82% (17/123) 1.68 2.3e-05 0.000597
GO:0048832 specification of plant organ number 3.25% (4/123) 4.56 2.6e-05 0.000662
GO:0048833 specification of floral organ number 3.25% (4/123) 4.56 2.6e-05 0.000662
GO:0048523 negative regulation of cellular process 24.39% (30/123) 1.12 2.9e-05 0.000728
GO:0008150 biological_process 78.86% (97/123) 0.36 3e-05 0.000735
GO:0032501 multicellular organismal process 33.33% (41/123) 0.89 3.2e-05 0.000776
GO:2001141 regulation of RNA biosynthetic process 21.14% (26/123) 1.23 3.4e-05 0.000781
GO:0034641 cellular nitrogen compound metabolic process 27.64% (34/123) 1.02 3.2e-05 0.000782
GO:0006355 regulation of DNA-templated transcription 21.14% (26/123) 1.23 3.2e-05 0.000783
GO:0010558 negative regulation of macromolecule biosynthetic process 13.01% (16/123) 1.7 3.4e-05 0.000787
GO:0009965 leaf morphogenesis 5.69% (7/123) 2.97 3.4e-05 0.000792
GO:1903506 regulation of nucleic acid-templated transcription 21.14% (26/123) 1.23 3.3e-05 0.000797
GO:0046483 heterocycle metabolic process 26.83% (33/123) 1.03 4e-05 0.000914
GO:0008152 metabolic process 57.72% (71/123) 0.54 4.1e-05 0.000915
GO:0032502 developmental process 43.9% (54/123) 0.7 4e-05 0.000916
GO:0003002 regionalization 9.76% (12/123) 2.03 4.1e-05 0.000922
GO:0042127 regulation of cell population proliferation 9.76% (12/123) 2.02 4.2e-05 0.000932
GO:0051172 negative regulation of nitrogen compound metabolic process 16.26% (20/123) 1.43 4.9e-05 0.00108
GO:0034394 protein localization to cell surface 2.44% (3/123) 5.37 5.1e-05 0.001112
GO:0044237 cellular metabolic process 51.22% (63/123) 0.6 5.5e-05 0.001188
GO:0034457 Mpp10 complex 1.63% (2/123) 7.31 5.9e-05 0.001246
GO:0071704 organic substance metabolic process 54.47% (67/123) 0.56 5.9e-05 0.001251
GO:0016071 mRNA metabolic process 9.76% (12/123) 1.96 6.4e-05 0.001341
GO:2000112 regulation of cellular macromolecule biosynthetic process 8.94% (11/123) 2.06 7.2e-05 0.001488
GO:0031327 negative regulation of cellular biosynthetic process 13.01% (16/123) 1.61 7.3e-05 0.00149
GO:0010076 maintenance of floral meristem identity 2.44% (3/123) 5.2 7.5e-05 0.001523
GO:0036094 small molecule binding 23.58% (29/123) 1.07 7.7e-05 0.001555
GO:0080006 internode patterning 2.44% (3/123) 5.14 8.4e-05 0.001681
GO:0003677 DNA binding 19.51% (24/123) 1.21 8.8e-05 0.001745
GO:0043168 anion binding 19.51% (24/123) 1.21 9e-05 0.001772
GO:0003779 actin binding 4.88% (6/123) 3.05 9.3e-05 0.001814
GO:0032555 purine ribonucleotide binding 16.26% (20/123) 1.36 9.4e-05 0.001825
GO:0009890 negative regulation of biosynthetic process 13.01% (16/123) 1.57 9.7e-05 0.001859
GO:0043227 membrane-bounded organelle 52.03% (64/123) 0.56 0.000104 0.001956
GO:0017076 purine nucleotide binding 16.26% (20/123) 1.35 0.000103 0.00196
GO:0035639 purine ribonucleoside triphosphate binding 15.45% (19/123) 1.39 0.000105 0.001965
GO:0030684 preribosome 4.07% (5/123) 3.41 0.000113 0.002102
GO:0003785 actin monomer binding 2.44% (3/123) 4.9 0.000141 0.002578
GO:0051015 actin filament binding 4.07% (5/123) 3.35 0.00014 0.002586
GO:0043231 intracellular membrane-bounded organelle 51.22% (63/123) 0.55 0.000147 0.00266
GO:0010557 positive regulation of macromolecule biosynthetic process 14.63% (18/123) 1.4 0.000149 0.002673
GO:0005654 nucleoplasm 13.01% (16/123) 1.51 0.000157 0.002795
GO:1905368 peptidase complex 3.25% (4/123) 3.89 0.000162 0.002878
GO:0045171 intercellular bridge 2.44% (3/123) 4.81 0.000169 0.00298
GO:0006417 regulation of translation 7.32% (9/123) 2.19 0.000173 0.003016
GO:0003006 developmental process involved in reproduction 26.83% (33/123) 0.92 0.000179 0.003094
GO:0032774 RNA biosynthetic process 5.69% (7/123) 2.58 0.000181 0.003122
GO:0009653 anatomical structure morphogenesis 19.51% (24/123) 1.13 0.000197 0.003357
GO:0033291 eukaryotic 80S initiation complex 1.63% (2/123) 6.5 0.000204 0.003365
GO:0042474 middle ear morphogenesis 1.63% (2/123) 6.5 0.000204 0.003365
GO:0048318 axial mesoderm development 1.63% (2/123) 6.5 0.000204 0.003365
GO:0070992 translation initiation complex 1.63% (2/123) 6.5 0.000204 0.003365
GO:0010604 positive regulation of macromolecule metabolic process 18.7% (23/123) 1.16 0.000209 0.003424
GO:0034645 cellular macromolecule biosynthetic process 8.94% (11/123) 1.89 0.000203 0.003447
GO:0048437 floral organ development 5.69% (7/123) 2.55 0.000213 0.003468
GO:1990904 ribonucleoprotein complex 9.76% (12/123) 1.77 0.000218 0.003512
GO:0006807 nitrogen compound metabolic process 43.09% (53/123) 0.63 0.000221 0.003547
GO:0022414 reproductive process 30.89% (38/123) 0.81 0.000225 0.003578
GO:0000166 nucleotide binding 21.14% (26/123) 1.06 0.000232 0.003616
GO:1901265 nucleoside phosphate binding 21.14% (26/123) 1.06 0.000232 0.003616
GO:0003756 protein disulfide isomerase activity 2.44% (3/123) 4.65 0.000237 0.003646
GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds 2.44% (3/123) 4.65 0.000237 0.003646
GO:0031328 positive regulation of cellular biosynthetic process 15.45% (19/123) 1.3 0.000232 0.003665
GO:0048522 positive regulation of cellular process 26.02% (32/123) 0.91 0.000248 0.003792
GO:0010154 fruit development 3.25% (4/123) 3.7 0.000268 0.004081
GO:0034463 90S preribosome assembly 1.63% (2/123) 6.31 0.000272 0.004104
GO:0034248 regulation of cellular amide metabolic process 7.32% (9/123) 2.09 0.000281 0.004225
GO:0005516 calmodulin binding 5.69% (7/123) 2.48 0.000286 0.004271
GO:0009891 positive regulation of biosynthetic process 15.45% (19/123) 1.28 0.000289 0.004277
GO:0010608 post-transcriptional regulation of gene expression 8.13% (10/123) 1.94 0.000298 0.004389
GO:1902494 catalytic complex 13.01% (16/123) 1.42 0.000317 0.00464
GO:0010087 phloem or xylem histogenesis 7.32% (9/123) 2.06 0.000334 0.004863
GO:0010492 maintenance of shoot apical meristem identity 3.25% (4/123) 3.6 0.000349 0.004988
GO:0090470 shoot organ boundary specification 1.63% (2/123) 6.14 0.000349 0.005009
GO:0042134 rRNA primary transcript binding 1.63% (2/123) 6.14 0.000349 0.005009
GO:0010089 xylem development 4.88% (6/123) 2.69 0.000363 0.005153
GO:0030218 erythrocyte differentiation 2.44% (3/123) 4.41 0.000392 0.005529
GO:0099080 supramolecular complex 8.94% (11/123) 1.77 0.000415 0.005819
GO:0005829 cytosol 26.02% (32/123) 0.87 0.000426 0.005947
GO:0000313 organellar ribosome 1.63% (2/123) 5.99 0.000435 0.006028
GO:0045069 regulation of viral genome replication 2.44% (3/123) 4.34 0.000446 0.006142
GO:0009888 tissue development 10.57% (13/123) 1.56 0.000476 0.006529
GO:0034470 ncRNA processing 8.13% (10/123) 1.85 0.00048 0.006538
GO:0051173 positive regulation of nitrogen compound metabolic process 17.07% (21/123) 1.13 0.000517 0.007
GO:0006725 cellular aromatic compound metabolic process 26.83% (33/123) 0.83 0.000538 0.007202
GO:0009954 proximal/distal pattern formation 2.44% (3/123) 4.25 0.000535 0.007205
GO:0044238 primary metabolic process 46.34% (57/123) 0.54 0.00055 0.007323
GO:0034660 ncRNA metabolic process 8.94% (11/123) 1.72 0.000556 0.007368
GO:0032040 small-subunit processome 2.44% (3/123) 4.22 0.000567 0.007467
GO:0030099 myeloid cell differentiation 3.25% (4/123) 3.39 0.000597 0.007818
GO:0009893 positive regulation of metabolic process 19.51% (24/123) 1.02 0.000632 0.00823
GO:0016072 rRNA metabolic process 5.69% (7/123) 2.28 0.000641 0.008296
GO:0019932 second-messenger-mediated signaling 4.07% (5/123) 2.85 0.000681 0.008765
GO:1905369 endopeptidase complex 2.44% (3/123) 4.12 0.000708 0.009068
GO:0048513 animal organ development 8.94% (11/123) 1.66 0.00077 0.009809
GO:0007389 pattern specification process 9.76% (12/123) 1.56 0.000816 0.010335
GO:0140513 nuclear protein-containing complex 10.57% (13/123) 1.47 0.000843 0.010627
GO:0048646 anatomical structure formation involved in morphogenesis 10.57% (13/123) 1.47 0.000859 0.010766
GO:1904816 positive regulation of protein localization to chromosome, telomeric region 1.63% (2/123) 5.5 0.000872 0.010874
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 4.88% (6/123) 2.43 0.000911 0.0113
GO:0001654 eye development 2.44% (3/123) 3.94 0.001004 0.012264
GO:0034654 nucleobase-containing compound biosynthetic process 7.32% (9/123) 1.84 0.000997 0.012309
GO:0042274 ribosomal small subunit biogenesis 1.63% (2/123) 5.41 0.001004 0.012325
GO:0019843 rRNA binding 4.07% (5/123) 2.7 0.001081 0.01313
GO:0043565 sequence-specific DNA binding 13.82% (17/123) 1.2 0.001131 0.013668
GO:1904814 regulation of protein localization to chromosome, telomeric region 1.63% (2/123) 5.31 0.001145 0.01377
GO:0031325 positive regulation of cellular metabolic process 17.07% (21/123) 1.04 0.001151 0.013771
GO:0003700 DNA-binding transcription factor activity 11.38% (14/123) 1.35 0.001192 0.01419
GO:1903900 regulation of viral life cycle 2.44% (3/123) 3.85 0.001204 0.014261
GO:0005730 nucleolus 9.76% (12/123) 1.49 0.00124 0.014611
GO:0015630 microtubule cytoskeleton 3.25% (4/123) 3.1 0.001264 0.014817
GO:0051246 regulation of protein metabolic process 13.01% (16/123) 1.23 0.001286 0.014935
GO:1901360 organic cyclic compound metabolic process 27.64% (34/123) 0.74 0.001285 0.014994
GO:0019722 calcium-mediated signaling 3.25% (4/123) 3.05 0.001462 0.016814
GO:0099513 polymeric cytoskeletal fiber 5.69% (7/123) 2.07 0.001457 0.016836
GO:0048363 mucilage pectin metabolic process 2.44% (3/123) 3.75 0.001487 0.017011
GO:0080050 regulation of seed development 3.25% (4/123) 3.04 0.001498 0.017052
GO:0009640 photomorphogenesis 3.25% (4/123) 3.03 0.001533 0.017374
GO:0042393 histone binding 4.07% (5/123) 2.58 0.001581 0.01783
GO:0010371 regulation of gibberellin biosynthetic process 2.44% (3/123) 3.69 0.001675 0.018797
GO:1905393 plant organ formation 5.69% (7/123) 2.03 0.001744 0.019385
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 13.01% (16/123) 1.19 0.001741 0.019447
GO:0022613 ribonucleoprotein complex biogenesis 3.25% (4/123) 2.97 0.00176 0.019476
GO:0003008 system process 6.5% (8/123) 1.85 0.001803 0.019859
GO:0001650 fibrillar center 2.44% (3/123) 3.63 0.001877 0.020576
GO:0099081 supramolecular polymer 5.69% (7/123) 2.0 0.001951 0.021192
GO:0099512 supramolecular fiber 5.69% (7/123) 2.0 0.001951 0.021192
GO:0006364 rRNA processing 4.88% (6/123) 2.2 0.002069 0.022367
GO:0008092 cytoskeletal protein binding 6.5% (8/123) 1.82 0.00209 0.022491
GO:0051254 positive regulation of RNA metabolic process 12.2% (15/123) 1.21 0.002127 0.022784
GO:0030154 cell differentiation 11.38% (14/123) 1.26 0.002139 0.022811
GO:0044154 histone H3-K14 acetylation 1.63% (2/123) 4.85 0.002177 0.023012
GO:0007498 mesoderm development 1.63% (2/123) 4.85 0.002177 0.023012
GO:0048506 regulation of timing of meristematic phase transition 4.07% (5/123) 2.46 0.002234 0.023401
GO:0048510 regulation of timing of transition from vegetative to reproductive phase 4.07% (5/123) 2.46 0.002234 0.023401
GO:0010197 polar nucleus fusion 2.44% (3/123) 3.54 0.002247 0.02343
GO:0033987 2-hydroxyisoflavanone dehydratase activity 1.63% (2/123) 4.79 0.00238 0.024709
GO:0099402 plant organ development 12.2% (15/123) 1.19 0.002419 0.025008
GO:0090697 post-embryonic plant organ morphogenesis 4.07% (5/123) 2.43 0.002478 0.025501
GO:0005198 structural molecule activity 5.69% (7/123) 1.92 0.002615 0.026799
GO:0140110 transcription regulator activity 12.2% (15/123) 1.17 0.002708 0.02763
GO:0016860 intramolecular oxidoreductase activity 2.44% (3/123) 3.44 0.002746 0.027777
GO:0000741 karyogamy 2.44% (3/123) 3.44 0.002746 0.027777
GO:0009719 response to endogenous stimulus 21.14% (26/123) 0.82 0.002774 0.02794
GO:0005874 microtubule 4.88% (6/123) 2.11 0.002827 0.028351
GO:0048731 system development 8.13% (10/123) 1.5 0.00291 0.029066
GO:0044249 cellular biosynthetic process 23.58% (29/123) 0.75 0.003 0.029833
GO:0010629 negative regulation of gene expression 7.32% (9/123) 1.6 0.003018 0.02989
GO:0004152 dihydroorotate dehydrogenase activity 0.81% (1/123) 8.31 0.003147 0.030273
GO:1903576 response to L-arginine 0.81% (1/123) 8.31 0.003147 0.030273
GO:0031339 negative regulation of vesicle fusion 0.81% (1/123) 8.31 0.003147 0.030273
GO:1905362 negative regulation of endosomal vesicle fusion 0.81% (1/123) 8.31 0.003147 0.030273
GO:1905364 regulation of endosomal vesicle fusion 0.81% (1/123) 8.31 0.003147 0.030273
GO:0006997 nucleus organization 3.25% (4/123) 2.75 0.003072 0.030299
GO:0019747 regulation of isoprenoid metabolic process 3.25% (4/123) 2.73 0.00319 0.030566
GO:0003690 double-stranded DNA binding 12.2% (15/123) 1.15 0.003119 0.03063
GO:0009314 response to radiation 15.45% (19/123) 0.98 0.003217 0.030694
GO:0044271 cellular nitrogen compound biosynthetic process 11.38% (14/123) 1.2 0.003236 0.030754
GO:1900425 negative regulation of defense response to bacterium 3.25% (4/123) 2.73 0.00325 0.030767
GO:0040034 regulation of development, heterochronic 4.07% (5/123) 2.32 0.003461 0.032629
GO:0043010 camera-type eye development 1.63% (2/123) 4.5 0.003519 0.033045
GO:0035091 phosphatidylinositol binding 3.25% (4/123) 2.65 0.003894 0.03642
GO:0010051 xylem and phloem pattern formation 4.88% (6/123) 2.01 0.003975 0.037031
GO:0005667 transcription regulator complex 4.07% (5/123) 2.27 0.003994 0.037065
GO:0032103 positive regulation of response to external stimulus 7.32% (9/123) 1.54 0.004066 0.037586
GO:0009937 regulation of gibberellic acid mediated signaling pathway 3.25% (4/123) 2.63 0.004103 0.037773
GO:0010223 secondary shoot formation 2.44% (3/123) 3.22 0.004162 0.03802
GO:0010346 shoot axis formation 2.44% (3/123) 3.22 0.004162 0.03802
GO:0046983 protein dimerization activity 9.76% (12/123) 1.27 0.004227 0.038468
GO:0009838 abscission 3.25% (4/123) 2.6 0.004467 0.040496
GO:0007423 sensory organ development 2.44% (3/123) 3.18 0.004513 0.040598
GO:0009416 response to light stimulus 14.63% (18/123) 0.97 0.004498 0.040622
GO:0003682 chromatin binding 5.69% (7/123) 1.76 0.004796 0.042982
GO:0045604 regulation of epidermal cell differentiation 1.63% (2/123) 4.27 0.004865 0.043274
GO:0042803 protein homodimerization activity 8.13% (10/123) 1.4 0.004857 0.043359
GO:0000911 cytokinesis by cell plate formation 2.44% (3/123) 3.13 0.005008 0.04421
GO:0006357 regulation of transcription by RNA polymerase II 8.94% (11/123) 1.31 0.004998 0.044291
GO:0045682 regulation of epidermis development 1.63% (2/123) 4.22 0.005159 0.044868
GO:0001501 skeletal system development 1.63% (2/123) 4.22 0.005159 0.044868
GO:0044260 cellular macromolecule metabolic process 16.26% (20/123) 0.89 0.005143 0.045065
GO:0050792 regulation of viral process 2.44% (3/123) 3.12 0.005137 0.045177
GO:0045893 positive regulation of DNA-templated transcription 10.57% (13/123) 1.16 0.005446 0.047188
GO:0042221 response to chemical 34.96% (43/123) 0.52 0.005518 0.047643
GO:0044877 protein-containing complex binding 7.32% (9/123) 1.46 0.005617 0.048321
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_162 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_238 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_345 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_37 0.025 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_65 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_81 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_108 0.008 Orthogroups with 8 Potato genotypes Compare
Sequences (123) (download table)

InterPro Domains

GO Terms

Family Terms