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  5. SOLTUB.AGRIA.G00000002508

SOLTUB.AGRIA.G00000002508


Description : Methyl-CpG-binding domain-containing protein 2


Gene families : OG_02_0000729 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002508
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_17


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
MF GO:0001046 core promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0001835 blastocyst hatching IEP Predict GO terms from Neighborhoods
BP GO:0002021 response to dietary excess IEP Predict GO terms from Neighborhoods
BP GO:0002064 epithelial cell development IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005275 amine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005372 water transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006928 obsolete movement of cell or subcellular component IEP Predict GO terms from Neighborhoods
BP GO:0007154 cell communication IEP Predict GO terms from Neighborhoods
BP GO:0007289 spermatid nucleus differentiation IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
BP GO:0007596 blood coagulation IEP Predict GO terms from Neighborhoods
BP GO:0007599 hemostasis IEP Predict GO terms from Neighborhoods
BP GO:0007605 sensory perception of sound IEP Predict GO terms from Neighborhoods
MF GO:0008013 beta-catenin binding IEP Predict GO terms from Neighborhoods
MF GO:0008022 protein C-terminus binding IEP Predict GO terms from Neighborhoods
MF GO:0008143 poly(A) binding IEP Predict GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0008494 translation activator activity IEP Predict GO terms from Neighborhoods
BP GO:0008587 imaginal disc-derived wing margin morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0008593 regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0008793 aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009314 response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0009416 response to light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009606 tropism IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009629 response to gravity IEP Predict GO terms from Neighborhoods
BP GO:0009630 gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009639 response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0009641 shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:0009646 response to absence of light IEP Predict GO terms from Neighborhoods
BP GO:0009683 indoleacetic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009684 indoleacetic acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009705 plant-type vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009723 response to ethylene IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009735 response to cytokinin IEP Predict GO terms from Neighborhoods
BP GO:0009739 response to gibberellin IEP Predict GO terms from Neighborhoods
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009744 response to sucrose IEP Predict GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009845 seed germination IEP Predict GO terms from Neighborhoods
BP GO:0009850 auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009851 auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009901 anther dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009914 hormone transport IEP Predict GO terms from Neighborhoods
BP GO:0009926 auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:0009958 positive gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009991 response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010074 maintenance of meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010078 maintenance of root meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010116 positive regulation of abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010252 auxin homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010256 endomembrane system organization IEP Predict GO terms from Neighborhoods
MF GO:0010326 methionine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010600 regulation of auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Predict GO terms from Neighborhoods
MF GO:0015200 methylammonium transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015204 urea transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015250 water channel activity IEP Predict GO terms from Neighborhoods
BP GO:0015840 urea transport IEP Predict GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019209 kinase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0019216 regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019755 one-carbon compound transport IEP Predict GO terms from Neighborhoods
BP GO:0019827 stem cell population maintenance IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0022416 chaeta development IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0030295 protein kinase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0030707 ovarian follicle cell development IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031063 regulation of histone deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0031065 positive regulation of histone deacetylation IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0031370 eukaryotic initiation factor 4G binding IEP Predict GO terms from Neighborhoods
MF GO:0031404 chloride ion binding IEP Predict GO terms from Neighborhoods
BP GO:0031667 response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031952 regulation of protein autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0032350 regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
CC GO:0032586 protein storage vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032873 negative regulation of stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0034285 response to disaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034754 cellular hormone metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0034973 Sid2-Mob1 complex IEP Predict GO terms from Neighborhoods
BP GO:0035188 hatching IEP Predict GO terms from Neighborhoods
BP GO:0035265 organ growth IEP Predict GO terms from Neighborhoods
BP GO:0035330 regulation of hippo signaling IEP Predict GO terms from Neighborhoods
BP GO:0042126 nitrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042128 nitrate assimilation IEP Predict GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042435 indole-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042446 hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042461 photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0042754 negative regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
MF GO:0042803 protein homodimerization activity IEP Predict GO terms from Neighborhoods
CC GO:0042807 central vacuole IEP Predict GO terms from Neighborhoods
BP GO:0043401 steroid hormone mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043562 cellular response to nitrogen levels IEP Predict GO terms from Neighborhoods
BP GO:0043627 response to estrogen IEP Predict GO terms from Neighborhoods
CC GO:0043674 columella IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045069 regulation of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045070 positive regulation of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045444 fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045570 regulation of imaginal disc growth IEP Predict GO terms from Neighborhoods
BP GO:0045572 positive regulation of imaginal disc growth IEP Predict GO terms from Neighborhoods
BP GO:0045747 positive regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046329 negative regulation of JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046885 regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Predict GO terms from Neighborhoods
MF GO:0047312 L-phenylalanine:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047434 indolepyruvate decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0047635 alanine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0047654 alliin lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0048235 pollen sperm cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048262 determination of dorsal/ventral asymmetry IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048513 animal organ development IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048599 oocyte development IEP Predict GO terms from Neighborhoods
BP GO:0048639 positive regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
MF GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050817 coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050872 white fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050954 sensory perception of mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051341 regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0051354 negative regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060212 negative regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060612 adipose tissue development IEP Predict GO terms from Neighborhoods
BP GO:0060613 fat pad development IEP Predict GO terms from Neighborhoods
BP GO:0060918 auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0061448 connective tissue development IEP Predict GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Predict GO terms from Neighborhoods
BP GO:0070050 neuron cellular homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Predict GO terms from Neighborhoods
BP GO:0070303 negative regulation of stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
MF GO:0070529 L-tryptophan aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070546 L-phenylalanine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070547 L-tyrosine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070548 L-glutamine aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071684 organism emergence from protective structure IEP Predict GO terms from Neighborhoods
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080098 L-tyrosine:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080099 L-methionine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080100 L-glutamine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0080170 hydrogen peroxide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0090207 regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090311 regulation of protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0090312 positive regulation of protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0090354 regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090693 plant organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:0098727 maintenance of cell number IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
MF GO:0103075 indole-3-pyruvate monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900152 negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1905615 positive regulation of developmental vegetative growth IEP Predict GO terms from Neighborhoods
CC GO:1990124 messenger ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
BP GO:2000468 regulation of peroxidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000469 negative regulation of peroxidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000622 regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predict GO terms from Neighborhoods
BP GO:2000623 negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016177 DNA-bd_dom_sf 85 109
No external refs found!