SOLTUB.AGRIA.G00000023972

Description : Choline monooxygenase

Gene families : OG_02_0009742 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023972
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_245

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006575	cellular modified amino acid metabolic process	None	Extended
BP	GO:0006577	amino-acid betaine metabolic process	None	Extended
BP	GO:0006578	amino-acid betaine biosynthetic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016708	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor	IEA	AHRD
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	None	Extended
MF	GO:0019133	choline monooxygenase activity	IEA	AHRD
BP	GO:0019285	glycine betaine biosynthetic process from choline	IEA	AHRD
BP	GO:0019695	choline metabolic process	None	Extended
BP	GO:0031455	glycine betaine metabolic process	None	Extended
BP	GO:0031456	glycine betaine biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042398	cellular modified amino acid biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	None	Extended
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEA	AHRD
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097164	ammonium ion metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0004123	cystathionine gamma-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004124	cysteine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004596	peptide alpha-N-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005513	detection of calcium ion	IEP	Predict GO terms from Neighborhoods
CC	GO:0005955	calcineurin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006474	N-terminal protein amino acid acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006534	cysteine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Predict GO terms from Neighborhoods
BP	GO:0006563	L-serine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006971	hypotonic response	IEP	Predict GO terms from Neighborhoods
MF	GO:0008080	N-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009268	response to pH	IEP	Predict GO terms from Neighborhoods
CC	GO:0009509	chromoplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0009566	fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Predict GO terms from Neighborhoods
BP	GO:0009826	unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009835	fruit ripening	IEP	Predict GO terms from Neighborhoods
BP	GO:0009836	fruit ripening, climacteric	IEP	Predict GO terms from Neighborhoods
BP	GO:0009860	pollen tube growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009932	cell tip growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010446	response to alkaline pH	IEP	Predict GO terms from Neighborhoods
MF	GO:0016410	N-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016836	hydro-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016999	antibiotic metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0017000	antibiotic biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0017196	N-terminal peptidyl-methionine acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018206	peptidyl-methionine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0019344	cysteine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019499	cyanide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019722	calcium-mediated signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0022626	cytosolic ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030007	cellular potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031248	protein acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031365	N-terminal protein amino acid modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0031414	N-terminal protein acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031417	NatC complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0032578	aleurone grain membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032780	negative regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042539	hypotonic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0043266	regulation of potassium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0044540	L-cystine L-cysteine-lyase (deaminating)	IEP	Predict GO terms from Neighborhoods
MF	GO:0047458	beta-pyrazolylalanine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048588	developmental cell growth	IEP	Predict GO terms from Neighborhoods
MF	GO:0050017	L-3-cyanoalanine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050234	pyrazolylalanine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050461	L-mimosine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050801	ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051189	prosthetic group metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051592	response to calcium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0055075	potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055081	anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0070279	vitamin B6 binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0080144	amino acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080145	cysteine homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0080146	L-cysteine desulfhydrase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097501	stress response to metal ion	IEP	Predict GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1902493	acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1903293	phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1990170	stress response to cadmium ion	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR017941	Rieske_2Fe-2S	4	53
IPR017941	Rieske_2Fe-2S	408	488
IPR017941	Rieske_2Fe-2S	54	129
IPR036922	Rieske_2Fe-2S_sf	2	51
IPR015879	Ring_hydroxy_dOase_asu_C_dom	197	315
IPR015879	Ring_hydroxy_dOase_asu_C_dom	559	726
IPR036922	Rieske_2Fe-2S_sf	54	158
IPR036922	Rieske_2Fe-2S_sf	373	518

External Links

No external refs found!

SOLTUB.AGRIA.G00000023972

Expression Profile

Co-expression Networks

Functional Annotation