SOLTUB.AGRIA.G00000024210

Description : Glycogen debranching enzyme

Gene families : OG_02_0009757 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024210
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_203

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005977	glycogen metabolic process	IEA	AHRD
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005983	starch catabolic process	IEA	AHRD
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006112	energy reserve metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009251	glucan catabolic process	None	Extended
CC	GO:0009501	amyloplast	IEA	AHRD
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009569	chloroplast starch grain	IEA	AHRD
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009660	amyloplast organization	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010021	amylopectin biosynthetic process	IEA	AHRD
CC	GO:0010368	chloroplast isoamylase complex	IEA	AHRD
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0019156	isoamylase activity	IEA	AHRD
BP	GO:0019252	starch biosynthetic process	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
CC	GO:0043033	isoamylase complex	None	Extended
CC	GO:0043036	starch grain	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044247	cellular polysaccharide catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044275	cellular carbohydrate catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:2000896	amylopectin metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004373	glycogen (starch) synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004614	phosphoglucomutase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005768	endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0005978	glycogen biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006006	glucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006094	gluconeogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006107	oxaloacetate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006757	ATP generation from ADP	IEP	Predict GO terms from Neighborhoods
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008878	glucose-1-phosphate adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009011	starch synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009648	photoperiodism	IEP	Predict GO terms from Neighborhoods
CC	GO:0009707	chloroplast outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009822	alkaloid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010246	rhamnogalacturonan I biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010395	rhamnogalacturonan I metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010410	hemicellulose metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015288	porin activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016529	sarcoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	IEP	Predict GO terms from Neighborhoods
MF	GO:0016833	oxo-acid-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predict GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0019319	hexose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019541	propionate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019543	propionate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019626	short-chain fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019629	propionate catabolic process, 2-methylcitrate cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0019750	chloroplast localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0022829	wide pore channel activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030018	Z disc	IEP	Predict GO terms from Neighborhoods
MF	GO:0030247	polysaccharide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030603	oxaloacetase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030929	ADPG pyrophosphorylase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030931	heterotetrameric ADPG pyrophosphorylase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0030957	Tat protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0033201	alpha-1,4-glucan synthase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0034426	etioplast membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044347	cell wall polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045036	protein targeting to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0045037	protein import into chloroplast stroma	IEP	Predict GO terms from Neighborhoods
BP	GO:0046031	ADP metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046421	methylisocitrate lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046459	short-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046527	glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0046930	pore complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0047529	2,3-dimethylmalate lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047776	citramalate lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048358	mucilage pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048363	mucilage pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048573	photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048577	negative regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0051644	plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051646	mitochondrion localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0070566	adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072526	pyridine-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0072598	protein localization to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080142	regulation of salicylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1901847	nicotinate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901848	nicotinate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902458	positive regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
CC	GO:1904724	tertiary granule lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:1904813	ficolin-1-rich granule lumen	IEP	Predict GO terms from Neighborhoods
MF	GO:2001070	starch binding	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR017853	Glycoside_hydrolase_SF	210	672
IPR006047	Glyco_hydro_13_cat_dom	249	354
IPR014756	Ig_E-set	81	219
IPR004193	Glyco_hydro_13_N	85	179

External Links

No external refs found!

SOLTUB.AGRIA.G00000024210

Expression Profile

Co-expression Networks

Functional Annotation