SOLTUB.AGRIA.G00000024245

Description : L-arabinokinase

Gene families : OG_02_0009762 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024245
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_59

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006012	galactose metabolic process	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
MF	GO:0009702	L-arabinokinase activity	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019200	carbohydrate kinase activity	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0019566	arabinose metabolic process	IEA	AHRD
CC	GO:0030054	cell junction	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046835	carbohydrate phosphorylation	IEA	AHRD
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Predict GO terms from Neighborhoods
MF	GO:0000400	four-way junction DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000403	Y-form DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000405	bubble DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001325	formation of extrachromosomal circular DNA	IEP	Predict GO terms from Neighborhoods
CC	GO:0001401	SAM complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0003878	ATP citrate synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006085	acetyl-CoA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006101	citrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006107	oxaloacetate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006695	cholesterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007008	outer mitochondrial membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007616	long-term memory	IEP	Predict GO terms from Neighborhoods
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008203	cholesterol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008258	head involution	IEP	Predict GO terms from Neighborhoods
MF	GO:0009378	four-way junction helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010225	response to UV-C	IEP	Predict GO terms from Neighborhoods
BP	GO:0010259	multicellular organism aging	IEP	Predict GO terms from Neighborhoods
BP	GO:0010272	response to silver ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0015936	coenzyme A metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0017117	single-stranded DNA-dependent ATP-dependent DNA helicase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030894	replisome	IEP	Predict GO terms from Neighborhoods
BP	GO:0031297	replication fork processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0031594	neuromuscular junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0032201	telomere maintenance via semi-conservative replication	IEP	Predict GO terms from Neighborhoods
MF	GO:0032356	oxidized DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032357	oxidized purine DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032404	mismatch repair complex binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032405	MutLalpha complex binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0033131	regulation of glucokinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033133	positive regulation of glucokinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0033202	DNA helicase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034086	maintenance of sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0034090	maintenance of meiotic sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0034340	response to type I interferon	IEP	Predict GO terms from Neighborhoods
CC	GO:0035578	azurophil granule lumen	IEP	Predict GO terms from Neighborhoods
MF	GO:0036310	ATP-dependent DNA/DNA annealing activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040009	regulation of growth rate	IEP	Predict GO terms from Neighborhoods
BP	GO:0042059	negative regulation of epidermal growth factor receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0043138	3'-5' DNA helicase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0043590	bacterial nucleoid	IEP	Predict GO terms from Neighborhoods
MF	GO:0044692	exoribonuclease activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044806	G-quadruplex DNA unwinding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045040	protein insertion into mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0045071	negative regulation of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0046898	response to cycloheximide	IEP	Predict GO terms from Neighborhoods
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0048149	behavioral response to ethanol	IEP	Predict GO terms from Neighborhoods
BP	GO:0048525	negative regulation of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051204	protein insertion into mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0051880	G-quadruplex DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0060321	acceptance of pollen	IEP	Predict GO terms from Neighborhoods
BP	GO:0060542	regulation of strand invasion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061158	3'-UTR-mediated mRNA destabilization	IEP	Predict GO terms from Neighborhoods
CC	GO:0061174	type I terminal bouton	IEP	Predict GO terms from Neighborhoods
CC	GO:0061177	type Is terminal bouton	IEP	Predict GO terms from Neighborhoods
MF	GO:0061749	forked DNA-dependent helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061820	telomeric D-loop disassembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0061821	telomeric D-loop binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0061849	telomeric G-quadruplex DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0062037	D-loop DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070336	flap-structured DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070337	3'-flap-structured DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071217	cellular response to external biotic stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0071598	neuronal ribonucleoprotein granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090151	establishment of protein localization to mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090399	replicative senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0090522	vesicle tethering involved in exocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090656	t-circle formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090657	telomeric loop disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0098530	positive regulation of strand invasion	IEP	Predict GO terms from Neighborhoods
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0099022	vesicle tethering	IEP	Predict GO terms from Neighborhoods
BP	GO:0140029	exocytic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0140666	annealing activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901185	negative regulation of ERBB signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902039	negative regulation of seed dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902570	protein localization to nucleolus	IEP	Predict GO terms from Neighborhoods
BP	GO:1903299	regulation of hexokinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1903301	positive regulation of hexokinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:1905762	CCR4-NOT complex binding	IEP	Predict GO terms from Neighborhoods
MF	GO:1905773	8-hydroxy-2'-deoxyguanosine DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:1990814	DNA/DNA annealing activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036554	GHMP_kinase_C_sf	716	962
IPR006204	GHMP_kinase_N_dom	624	690
IPR013750	GHMP_kinase_C_dom	868	943
IPR019539	GalKase_N	486	526
IPR020568	Ribosomal_S5_D2-typ_fold	487	705

External Links

No external refs found!

SOLTUB.AGRIA.G00000024245

Expression Profile

Co-expression Networks

Functional Annotation