SOLTUB.AGRIA.G00000002553

Description : Prolyl 4-hydroxylase subunit alpha-2

Gene families : OG_02_0004328 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002553
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_183

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004656	procollagen-proline 4-dioxygenase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005789	endoplasmic reticulum membrane	IEA	AHRD
CC	GO:0005802	trans-Golgi network	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	None	Extended
BP	GO:0018126	protein hydroxylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	IEA	AHRD
BP	GO:0019511	peptidyl-proline hydroxylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019798	procollagen-proline dioxygenase activity	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0031406	carboxylic acid binding	None	Extended
MF	GO:0031418	L-ascorbic acid binding	IEA	AHRD
MF	GO:0031543	peptidyl-proline dioxygenase activity	None	Extended
MF	GO:0031545	peptidyl-proline 4-dioxygenase activity	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043177	organic acid binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048029	monosaccharide binding	None	Extended
BP	GO:0048468	cell development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080147	root hair cell development	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain	IEP	Predict GO terms from Neighborhoods
BP	GO:0000281	mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0000338	protein deneddylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0000822	inositol hexakisphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001745	compound eye morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0002090	regulation of receptor internalization	IEP	Predict GO terms from Neighborhoods
MF	GO:0003724	RNA helicase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005483	soluble NSF attachment protein activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	IEP	Predict GO terms from Neighborhoods
CC	GO:0005798	Golgi-associated vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0005801	cis-Golgi network	IEP	Predict GO terms from Neighborhoods
CC	GO:0005844	polysome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005902	microvillus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005934	cellular bud tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0006405	RNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006406	mRNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006409	tRNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006415	translational termination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006900	vesicle budding from membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007030	Golgi organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007267	cell-cell signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0007268	chemical synaptic transmission	IEP	Predict GO terms from Neighborhoods
BP	GO:0007274	neuromuscular synaptic transmission	IEP	Predict GO terms from Neighborhoods
BP	GO:0007281	germ cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007286	spermatid development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007430	terminal branching, open tracheal system	IEP	Predict GO terms from Neighborhoods
BP	GO:0007602	phototransduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0008180	COP9 signalosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008553	P-type proton-exporting transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009583	detection of light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009585	red, far-red light phototransduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010387	COP9 signalosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010807	regulation of synaptic vesicle priming	IEP	Predict GO terms from Neighborhoods
MF	GO:0015662	P-type ion transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0016050	vesicle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEP	Predict GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019905	syntaxin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
CC	GO:0030134	COPII-coated ER to Golgi transport vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0030182	neuron differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030667	secretory granule membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0030718	germ-line stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031201	SNARE complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031410	cytoplasmic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0031629	synaptic vesicle fusion to presynaptic active zone membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032781	positive regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0033180	proton-transporting V-type ATPase, V1 domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0033181	plasma membrane proton-transporting V-type ATPase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0033391	chromatoid body	IEP	Predict GO terms from Neighborhoods
BP	GO:0035249	synaptic transmission, glutamatergic	IEP	Predict GO terms from Neighborhoods
BP	GO:0035494	SNARE complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0035964	COPI-coated vesicle budding	IEP	Predict GO terms from Neighborhoods
BP	GO:0036099	female germ-line stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0043178	alcohol binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0043195	terminal bouton	IEP	Predict GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0044614	nuclear pore cytoplasmic filaments	IEP	Predict GO terms from Neighborhoods
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predict GO terms from Neighborhoods
BP	GO:0045176	apical protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Predict GO terms from Neighborhoods
BP	GO:0048138	germ-line cyst encapsulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048140	male germ-line cyst encapsulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048259	regulation of receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048499	synaptic vesicle membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0048526	imaginal disc-derived wing expansion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048592	eye morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048754	branching morphogenesis of an epithelial tube	IEP	Predict GO terms from Neighborhoods
BP	GO:0051031	tRNA transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0051117	ATPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0060446	branching involved in open tracheal system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061138	morphogenesis of a branching epithelium	IEP	Predict GO terms from Neighborhoods
CC	GO:0070044	synaptobrevin 2-SNAP-25-syntaxin-1a complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0070122	obsolete isopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090596	sensory organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0097064	ncRNA export from nucleus	IEP	Predict GO terms from Neighborhoods
CC	GO:0097708	intracellular vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0098794	postsynapse	IEP	Predict GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098858	actin-based cell projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0098916	anterograde trans-synaptic signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0099500	vesicle fusion to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0099536	synaptic signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0099537	trans-synaptic signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0140029	exocytic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0140358	P-type transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902659	regulation of glucose mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902991	regulation of amyloid precursor protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990641	response to iron ion starvation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003582	ShKT_dom	255	295
IPR005123	Oxoglu/Fe-dep_dioxygenase	120	240

External Links

No external refs found!

SOLTUB.AGRIA.G00000002553

Expression Profile

Co-expression Networks

Functional Annotation