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  5. SOLTUB.AGRIA.G00000024410

SOLTUB.AGRIA.G00000024410


Description : Actin-binding LIM 3


Gene families : OG_02_0015681 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024410
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_71


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001933 negative regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predict GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Predict GO terms from Neighborhoods
CC GO:0005884 actin filament IEP Predict GO terms from Neighborhoods
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006116 NADH oxidation IEP Predict GO terms from Neighborhoods
BP GO:0006734 NADH metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007131 reciprocal meiotic recombination IEP Predict GO terms from Neighborhoods
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP Predict GO terms from Neighborhoods
BP GO:0009833 plant-type primary cell wall biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0010005 cortical microtubule, transverse to long axis IEP Predict GO terms from Neighborhoods
BP GO:0010192 mucilage biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0010330 cellulose synthase complex IEP Predict GO terms from Neighborhoods
BP GO:0010395 rhamnogalacturonan I metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010400 rhamnogalacturonan I side chain metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016500 protein-hormone receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predict GO terms from Neighborhoods
BP GO:0019221 cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030336 negative regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0035825 homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0043622 cortical microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046425 regulation of receptor signaling pathway via JAK-STAT IEP Predict GO terms from Neighborhoods
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0051015 actin filament binding IEP Predict GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Predict GO terms from Neighborhoods
BP GO:0052546 cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052646 alditol phosphate metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0055028 cortical microtubule IEP Predict GO terms from Neighborhoods
BP GO:0072359 circulatory system development IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
CC GO:0099081 supramolecular polymer IEP Predict GO terms from Neighborhoods
CC GO:0099512 supramolecular fiber IEP Predict GO terms from Neighborhoods
CC GO:0099513 polymeric cytoskeletal fiber IEP Predict GO terms from Neighborhoods
BP GO:0140527 reciprocal homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:2000146 negative regulation of cell motility IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025486 DUF4378 763 891
No external refs found!