SOLTUB.AGRIA.G00000024461

Description : ATPase family associated with various cellular activities (AAA)

Gene families : OG_02_0015682 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024461
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_96

Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	None	Extended
BP	GO:0000076	DNA replication checkpoint signaling	None	Extended
MF	GO:0000166	nucleotide binding	IEA	AHRD
CC	GO:0000785	chromatin	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	AHRD
MF	GO:0003682	chromatin binding	IEA	AHRD
MF	GO:0003689	DNA clamp loader activity	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005663	DNA replication factor C complex	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	AHRD
BP	GO:0006261	DNA-templated DNA replication	IEA	AHRD
BP	GO:0006271	DNA strand elongation involved in DNA replication	IEA	AHRD
BP	GO:0006272	leading strand elongation	None	Extended
BP	GO:0006281	DNA repair	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0007093	mitotic cell cycle checkpoint signaling	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007346	regulation of mitotic cell cycle	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010948	negative regulation of cell cycle process	None	Extended
BP	GO:0010972	negative regulation of G2/M transition of mitotic cell cycle	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022616	DNA strand elongation	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031389	Rad17 RFC-like complex	IEA	AHRD
CC	GO:0031390	Ctf18 RFC-like complex	IEA	AHRD
CC	GO:0031391	Elg1 RFC-like complex	IEA	AHRD
BP	GO:0031570	DNA integrity checkpoint signaling	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033314	mitotic DNA replication checkpoint signaling	IEA	AHRD
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034644	cellular response to UV	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043599	nuclear DNA replication factor C complex	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044774	mitotic DNA integrity checkpoint signaling	None	Extended
BP	GO:0044818	mitotic G2/M transition checkpoint	None	Extended
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045930	negative regulation of mitotic cell cycle	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
MF	GO:0061860	DNA clamp unloader activity	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070914	UV-damage excision repair	IEA	AHRD
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090618	DNA clamp unloading	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:0140603	obsolete ATP hydrolysis activity	IEA	AHRD
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901987	regulation of cell cycle phase transition	None	Extended
BP	GO:1901988	negative regulation of cell cycle phase transition	None	Extended
BP	GO:1901990	regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1902296	DNA strand elongation involved in cell cycle DNA replication	None	Extended
BP	GO:1902319	DNA strand elongation involved in nuclear cell cycle DNA replication	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1902749	regulation of cell cycle G2/M phase transition	None	Extended
BP	GO:1902750	negative regulation of cell cycle G2/M phase transition	None	Extended
BP	GO:1902983	DNA strand elongation involved in mitotic DNA replication	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1903460	mitotic DNA replication leading strand elongation	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predict GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

External Links

No external refs found!

SOLTUB.AGRIA.G00000024461

Expression Profile

Co-expression Networks

Functional Annotation