SOLTUB.AGRIA.G00000024480


Description : Chlorophyll a-b binding protein, chloroplastic


Gene families : OG_02_0015685 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024480
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_49


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
BP GO:0009409 response to cold IEA AHRD
CC GO:0009535 chloroplast thylakoid membrane IEA AHRD
BP GO:0009644 response to high light intensity IEA AHRD
BP GO:0009645 response to low light intensity stimulus IEA AHRD
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEA AHRD
CC GO:0009782 photosystem I antenna complex IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
CC GO:0010287 plastoglobule IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
MF GO:0016168 chlorophyll binding IEA AHRD
BP GO:0018298 obsolete protein-chromophore linkage IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
MF GO:0031409 pigment binding IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0080167 response to karrikin IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000314 organellar small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000315 organellar large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0000427 plastid-encoded plastid RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0002347 response to tumor cell IEP Predict GO terms from Neighborhoods
BP GO:0002357 defense response to tumor cell IEP Predict GO terms from Neighborhoods
BP GO:0002532 production of molecular mediator involved in inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0002536 respiratory burst involved in inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0002679 respiratory burst involved in defense response IEP Predict GO terms from Neighborhoods
BP GO:0002695 negative regulation of leukocyte activation IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004047 aminomethyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004356 glutamate-ammonia ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
MF GO:0005504 fatty acid binding IEP Predict GO terms from Neighborhoods
MF GO:0005527 macrolide binding IEP Predict GO terms from Neighborhoods
MF GO:0005528 FK506 binding IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0005763 mitochondrial small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
CC GO:0005960 glycine cleavage complex IEP Predict GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Predict GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006520 cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006544 glycine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006546 glycine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006730 one-carbon metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008379 thioredoxin peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008430 selenium binding IEP Predict GO terms from Neighborhoods
MF GO:0008785 alkyl hydroperoxide reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009063 cellular amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009071 serine family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009249 protein lipoylation IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0009344 nitrite reductase complex [NAD(P)H] IEP Predict GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Predict GO terms from Neighborhoods
CC GO:0009508 plastid chromosome IEP Predict GO terms from Neighborhoods
CC GO:0009515 granal stacked thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Predict GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Predict GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009536 plastid IEP Predict GO terms from Neighborhoods
CC GO:0009543 chloroplast thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
BP GO:0009688 abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predict GO terms from Neighborhoods
BP GO:0009773 photosynthetic electron transport in photosystem I IEP Predict GO terms from Neighborhoods
CC GO:0009842 cyanelle IEP Predict GO terms from Neighborhoods
BP GO:0009853 photorespiration IEP Predict GO terms from Neighborhoods
MF GO:0010176 homogentisate phytyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0010189 vitamin E biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Predict GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Predict GO terms from Neighborhoods
MF GO:0010242 oxygen evolving activity IEP Predict GO terms from Neighborhoods
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predict GO terms from Neighborhoods
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0010297 heteropolysaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
MF GO:0010354 homogentisate prenyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0015935 small ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Predict GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016673 oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predict GO terms from Neighborhoods
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predict GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0018158 protein oxidation IEP Predict GO terms from Neighborhoods
BP GO:0018171 peptidyl-cysteine oxidation IEP Predict GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Predict GO terms from Neighborhoods
CC GO:0018995 host cellular component IEP Predict GO terms from Neighborhoods
CC GO:0019034 viral replication complex IEP Predict GO terms from Neighborhoods
BP GO:0019253 reductive pentose-phosphate cycle IEP Predict GO terms from Neighborhoods
BP GO:0019430 removal of superoxide radicals IEP Predict GO terms from Neighborhoods
BP GO:0019464 glycine decarboxylation via glycine cleavage system IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019676 ammonia assimilation cycle IEP Predict GO terms from Neighborhoods
BP GO:0019685 photosynthesis, dark reaction IEP Predict GO terms from Neighborhoods
BP GO:0019740 nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0022408 negative regulation of cell-cell adhesion IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0022626 cytosolic ribosome IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Predict GO terms from Neighborhoods
CC GO:0030093 chloroplast photosystem I IEP Predict GO terms from Neighborhoods
CC GO:0030095 chloroplast photosystem II IEP Predict GO terms from Neighborhoods
CC GO:0030096 plasma membrane-derived thylakoid photosystem II IEP Predict GO terms from Neighborhoods
BP GO:0030193 regulation of blood coagulation IEP Predict GO terms from Neighborhoods
BP GO:0030194 positive regulation of blood coagulation IEP Predict GO terms from Neighborhoods
MF GO:0031405 lipoic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0031664 regulation of lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0031665 negative regulation of lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0031977 thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0031978 plastid thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0032088 negative regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0032544 plastid translation IEP Predict GO terms from Neighborhoods
BP GO:0032943 mononuclear cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0033643 host cell part IEP Predict GO terms from Neighborhoods
CC GO:0033646 host intracellular part IEP Predict GO terms from Neighborhoods
MF GO:0033728 divinyl chlorophyllide a 8-vinyl-reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0034256 chlorophyll(ide) b reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042098 T cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0042360 vitamin E metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042549 photosystem II stabilization IEP Predict GO terms from Neighborhoods
CC GO:0042644 chloroplast nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042646 plastid nucleoid IEP Predict GO terms from Neighborhoods
MF GO:0043023 ribosomal large subunit binding IEP Predict GO terms from Neighborhoods
MF GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0043028 cysteine-type endopeptidase regulator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Predict GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043289 apocarotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044094 host cell nuclear part IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predict GO terms from Neighborhoods
BP GO:0045580 regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045581 negative regulation of T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045620 negative regulation of lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046651 lymphocyte proliferation IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048538 thymus development IEP Predict GO terms from Neighborhoods
BP GO:0050818 regulation of coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050820 positive regulation of coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050866 negative regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050868 negative regulation of T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0051092 positive regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051250 negative regulation of lymphocyte activation IEP Predict GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Predict GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Predict GO terms from Neighborhoods
BP GO:0051607 defense response to virus IEP Predict GO terms from Neighborhoods
MF GO:0051744 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0051920 peroxiredoxin activity IEP Predict GO terms from Neighborhoods
MF GO:0052662 zeaxanthin epoxidase activity IEP Predict GO terms from Neighborhoods
BP GO:0061041 regulation of wound healing IEP Predict GO terms from Neighborhoods
MF GO:0070181 small ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0070661 leukocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0071781 endoplasmic reticulum cisternal network IEP Predict GO terms from Neighborhoods
CC GO:0085035 haustorium IEP Predict GO terms from Neighborhoods
BP GO:0090303 positive regulation of wound healing IEP Predict GO terms from Neighborhoods
BP GO:0090391 granum assembly IEP Predict GO terms from Neighborhoods
BP GO:0097753 membrane bending IEP Predict GO terms from Neighborhoods
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP Predict GO terms from Neighborhoods
MF GO:0102661 homogentisate solanyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0103012 ferredoxin-thioredoxin reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0140546 defense response to symbiont IEP Predict GO terms from Neighborhoods
MF GO:0140824 thioredoxin-dependent peroxiredoxin activity IEP Predict GO terms from Neighborhoods
BP GO:1900046 regulation of hemostasis IEP Predict GO terms from Neighborhoods
BP GO:1900048 positive regulation of hemostasis IEP Predict GO terms from Neighborhoods
BP GO:1901099 negative regulation of signal transduction in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901710 regulation of homoserine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902106 negative regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1902645 tertiary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903034 regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1903036 positive regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1903038 negative regulation of leukocyte cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:1903707 negative regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:2000282 regulation of cellular amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001236 regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001239 regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
BP GO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 66 234
No external refs found!