SOLTUB.AGRIA.G00000024492

Description : GEM-like 1

Gene families : OG_02_0020309 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024492
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_186

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010026	trichome differentiation	IEA	AHRD
BP	GO:0010029	regulation of seed germination	IEA	AHRD
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010162	seed dormancy process	None	Extended
BP	GO:0010231	maintenance of seed dormancy	None	Extended
BP	GO:0010482	regulation of epidermal cell division	IEA	AHRD
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051302	regulation of cell division	None	Extended
BP	GO:0051567	histone H3-K9 methylation	IEA	AHRD
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0097437	maintenance of dormancy	None	Extended
BP	GO:0098755	maintenance of seed dormancy by absisic acid	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004620	phospholipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004629	phospholipase C activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	Predict GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006664	glycolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006811	ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006820	anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006836	neurotransmitter transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006857	oligopeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007584	response to nutrient	IEP	Predict GO terms from Neighborhoods
CC	GO:0008021	synaptic vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008504	monoamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008509	anion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009395	phospholipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009687	abscisic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009991	response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0010200	response to chitin	IEP	Predict GO terms from Neighborhoods
BP	GO:0010243	response to organonitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0010498	proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015101	organic cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015651	quaternary ammonium group transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015695	organic cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015697	quaternary ammonium group transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015706	nitrate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015718	monocarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015833	peptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015844	monoamine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015850	organic hydroxy compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016036	cellular response to phosphate starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016298	lipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030133	transport vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031667	response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0033273	response to vitamin	IEP	Predict GO terms from Neighborhoods
BP	GO:0033591	response to L-ascorbic acid	IEP	Predict GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042886	amide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042938	dipeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043288	apocarotenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051937	catecholamine transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0052642	lysophosphatidic acid phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0070382	exocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0071629	cytoplasm protein quality control by the ubiquitin-proteasome system	IEP	Predict GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0080054	low-affinity nitrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0090416	nicotinate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0090417	N-methylnicotinate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098661	inorganic anion transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0099503	secretory vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0140455	cytoplasm protein quality control	IEP	Predict GO terms from Neighborhoods
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901698	response to nitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1902025	nitrate import	IEP	Predict GO terms from Neighborhoods
BP	GO:1902644	tertiary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903509	liposaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2001142	nicotinate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2001143	N-methylnicotinate transport	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004182	GRAM	143	257

External Links

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SOLTUB.AGRIA.G00000024492

Expression Profile

Co-expression Networks

Functional Annotation