SOLTUB.AGRIA.G00000025086

Description : RING-H2 zinc finger protein

Gene families : OG_02_0015757 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025086
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_215

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009687	abscisic acid metabolic process	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009739	response to gibberellin	IEA	AHRD
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	IEA	AHRD
MF	GO:0031625	ubiquitin protein ligase binding	IEA	AHRD
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043288	apocarotenoid metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0047484	regulation of response to osmotic stress	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0065003	protein-containing complex assembly	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080167	response to karrikin	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902644	tertiary alcohol metabolic process	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000281	mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0004512	inositol-3-phosphate synthase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005765	lysosomal membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006020	inositol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006021	inositol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006658	phosphatidylserine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006659	phosphatidylserine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007155	cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007602	phototransduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008432	JUN kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009581	detection of external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009582	detection of abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009583	detection of light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009585	red, far-red light phototransduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0009641	shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010016	shoot system morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010022	meristem determinacy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010218	response to far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010582	floral meristem determinacy	IEP	Predict GO terms from Neighborhoods
MF	GO:0016872	intramolecular lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019751	polyol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031589	cell-substrate adhesion	IEP	Predict GO terms from Neighborhoods
CC	GO:0031902	late endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0043647	inositol phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046173	polyol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048438	floral whorl development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048467	gynoecium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0070302	regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070304	positive regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0080127	fruit septum development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080190	lateral growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0080191	secondary thickening	IEP	Predict GO terms from Neighborhoods
CC	GO:0098852	lytic vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1900618	regulation of shoot system morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901371	regulation of leaf morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903725	regulation of phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905328	plant septum development	IEP	Predict GO terms from Neighborhoods
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	93	137

External Links

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SOLTUB.AGRIA.G00000025086

Expression Profile

Co-expression Networks

Functional Annotation