Coexpression cluster: Cluster_215 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901615 organic hydroxy compound metabolic process 18.18% (14/77) 2.61 0.0 7.4e-05
GO:0006629 lipid metabolic process 25.97% (20/77) 1.79 1e-06 0.000463
GO:0009687 abscisic acid metabolic process 5.19% (4/77) 5.18 5e-06 0.001539
GO:0043288 apocarotenoid metabolic process 5.19% (4/77) 5.18 5e-06 0.001539
GO:0016298 lipase activity 7.79% (6/77) 3.53 1.4e-05 0.003023
GO:1902644 tertiary alcohol metabolic process 5.19% (4/77) 4.84 1.2e-05 0.003186
GO:0052689 carboxylic ester hydrolase activity 9.09% (7/77) 3.06 2.2e-05 0.004033
GO:0006714 sesquiterpenoid metabolic process 5.19% (4/77) 4.25 6.2e-05 0.007289
GO:0043436 oxoacid metabolic process 20.78% (16/77) 1.61 5e-05 0.007304
GO:0046593 mandelonitrile lyase activity 3.9% (3/77) 5.25 6.9e-05 0.007476
GO:0016139 glycoside catabolic process 3.9% (3/77) 5.32 5.9e-05 0.007681
GO:0050529 polyneuridine-aldehyde esterase activity 3.9% (3/77) 5.4 5e-05 0.00815
GO:0016830 carbon-carbon lyase activity 6.49% (5/77) 3.5 8.3e-05 0.008361
GO:0009628 response to abiotic stimulus 37.66% (29/77) 0.97 0.000118 0.008503
GO:0019752 carboxylic acid metabolic process 18.18% (14/77) 1.65 0.000124 0.008526
GO:0080031 methyl salicylate esterase activity 3.9% (3/77) 5.05 0.000105 0.008542
GO:0080032 methyl jasmonate esterase activity 3.9% (3/77) 5.05 0.000105 0.008542
GO:0080030 methyl indole-3-acetate esterase activity 3.9% (3/77) 4.93 0.000135 0.008773
GO:0050832 defense response to fungus 14.29% (11/77) 1.96 0.000117 0.008923
GO:0006950 response to stress 48.05% (37/77) 0.78 0.000145 0.008988
GO:0006082 organic acid metabolic process 20.78% (16/77) 1.53 9.8e-05 0.00911
GO:0120091 jasmonic acid hydrolase 3.9% (3/77) 4.71 0.00021 0.010925
GO:0009725 response to hormone 25.97% (20/77) 1.21 0.000248 0.011122
GO:0032787 monocarboxylic acid metabolic process 14.29% (11/77) 1.85 0.000223 0.011187
GO:0080127 fruit septum development 2.6% (2/77) 6.53 0.000208 0.011298
GO:1901847 nicotinate metabolic process 2.6% (2/77) 6.53 0.000208 0.011298
GO:0016832 aldehyde-lyase activity 3.9% (3/77) 4.64 0.000244 0.011329
GO:0009415 response to water 15.58% (12/77) 1.71 0.000265 0.011503
GO:0010200 response to chitin 10.39% (8/77) 2.28 0.000239 0.011514
GO:0009696 salicylic acid metabolic process 5.19% (4/77) 3.81 0.000199 0.01179
GO:0080191 secondary thickening 2.6% (2/77) 6.29 0.000295 0.012373
GO:1900366 negative regulation of defense response to insect 3.9% (3/77) 4.51 0.000322 0.013083
GO:0018958 phenol-containing compound metabolic process 6.49% (5/77) 3.07 0.000334 0.013178
GO:0001101 response to acid chemical 15.58% (12/77) 1.63 0.000448 0.01715
GO:0009409 response to cold 14.29% (11/77) 1.7 0.000528 0.019648
GO:1990641 response to iron ion starvation 3.9% (3/77) 4.16 0.000646 0.020524
GO:1905328 plant septum development 2.6% (2/77) 5.82 0.000574 0.020766
GO:1904426 positive regulation of GTP binding 2.6% (2/77) 5.74 0.000641 0.020861
GO:1905099 positive regulation of guanyl-nucleotide exchange factor activity 2.6% (2/77) 5.74 0.000641 0.020861
GO:2001108 positive regulation of Rho guanyl-nucleotide exchange factor activity 2.6% (2/77) 5.74 0.000641 0.020861
GO:0009719 response to endogenous stimulus 25.97% (20/77) 1.11 0.000598 0.021052
GO:0009414 response to water deprivation 14.29% (11/77) 1.65 0.000718 0.022267
GO:0050896 response to stimulus 57.14% (44/77) 0.56 0.000804 0.02326
GO:0044255 cellular lipid metabolic process 16.88% (13/77) 1.46 0.000794 0.023508
GO:0010033 response to organic substance 33.77% (26/77) 0.89 0.00078 0.023622
GO:0051241 negative regulation of multicellular organismal process 10.39% (8/77) 2.0 0.000854 0.023646
GO:1901658 glycosyl compound catabolic process 3.9% (3/77) 4.03 0.00084 0.023764
GO:1905097 regulation of guanyl-nucleotide exchange factor activity 2.6% (2/77) 5.46 0.000943 0.025589
GO:0042631 cellular response to water deprivation 5.19% (4/77) 3.18 0.001024 0.027214
GO:0044281 small molecule metabolic process 22.08% (17/77) 1.17 0.001077 0.028051
GO:0048581 negative regulation of post-embryonic development 7.79% (6/77) 2.36 0.001133 0.028375
GO:0010035 response to inorganic substance 22.08% (17/77) 1.17 0.001122 0.028636
GO:0009820 alkaloid metabolic process 7.79% (6/77) 2.34 0.001203 0.029011
GO:0071462 cellular response to water stimulus 5.19% (4/77) 3.12 0.001184 0.029095
GO:0061630 ubiquitin protein ligase activity 6.49% (5/77) 2.64 0.001263 0.029356
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 3.9% (3/77) 3.83 0.001259 0.029807
GO:0009805 coumarin biosynthetic process 3.9% (3/77) 3.8 0.001328 0.030334
GO:0009605 response to external stimulus 35.06% (27/77) 0.82 0.001377 0.030398
GO:0035834 indole alkaloid metabolic process 5.19% (4/77) 3.06 0.001403 0.030445
GO:0061659 ubiquitin-like protein ligase activity 6.49% (5/77) 2.62 0.001376 0.030885
GO:0016829 lyase activity 9.09% (7/77) 2.06 0.001482 0.031114
GO:1901575 organic substance catabolic process 18.18% (14/77) 1.29 0.001508 0.031163
GO:0009789 positive regulation of abscisic acid-activated signaling pathway 5.19% (4/77) 3.04 0.001467 0.031316
GO:1904424 regulation of GTP binding 2.6% (2/77) 5.08 0.001608 0.032705
GO:0009804 coumarin metabolic process 3.9% (3/77) 3.69 0.001667 0.033395
GO:0017153 sodium:dicarboxylate symporter activity 1.3% (1/77) 8.99 0.00197 0.035623
GO:0010421 hydrogen peroxide-mediated programmed cell death 2.6% (2/77) 4.94 0.001944 0.035647
GO:0036474 cell death in response to hydrogen peroxide 2.6% (2/77) 4.94 0.001944 0.035647
GO:0071229 cellular response to acid chemical 5.19% (4/77) 2.92 0.002002 0.035706
GO:0009056 catabolic process 19.48% (15/77) 1.19 0.001913 0.036101
GO:0010150 leaf senescence 7.79% (6/77) 2.22 0.001832 0.036139
GO:0010582 floral meristem determinacy 3.9% (3/77) 3.63 0.001877 0.036474
GO:0006066 alcohol metabolic process 6.49% (5/77) 2.51 0.001905 0.036474
GO:0080167 response to karrikin 7.79% (6/77) 2.19 0.002084 0.036662
GO:1901700 response to oxygen-containing compound 29.87% (23/77) 0.87 0.00218 0.037843
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_235 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_242 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_9 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_25 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_56 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_87 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_113 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_131 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_175 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_193 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_198 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_202 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (77) (download table)

InterPro Domains

GO Terms

Family Terms