SOLTUB.AGRIA.G00000025203

Description : Chlorophyll a-b binding protein, chloroplastic

Gene families : OG_02_0009843 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025203
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_49

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005774	vacuolar membrane	IEA	AHRD
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009269	response to desiccation	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009414	response to water deprivation	None	Extended
BP	GO:0009415	response to water	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009503	thylakoid light-harvesting complex	None	Extended
CC	GO:0009517	PSII associated light-harvesting complex II	IEA	AHRD
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009522	photosystem I	IEA	AHRD
CC	GO:0009523	photosystem II	IEA	AHRD
CC	GO:0009526	plastid envelope	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	IEA	AHRD
BP	GO:0009645	response to low light intensity stimulus	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	None	Extended
BP	GO:0009765	photosynthesis, light harvesting	None	Extended
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEA	AHRD
BP	GO:0009769	photosynthesis, light harvesting in photosystem II	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010114	response to red light	IEA	AHRD
BP	GO:0010119	regulation of stomatal movement	None	Extended
BP	GO:0010218	response to far red light	IEA	AHRD
CC	GO:0010287	plastoglobule	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
MF	GO:0016168	chlorophyll binding	IEA	AHRD
BP	GO:0018298	obsolete protein-chromophore linkage	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019904	protein domain specific binding	IEA	AHRD
CC	GO:0030076	light-harvesting complex	None	Extended
BP	GO:0030104	water homeostasis	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071215	cellular response to abscisic acid stimulus	IEA	AHRD
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0090333	regulation of stomatal closure	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0097306	cellular response to alcohol	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098807	chloroplast thylakoid membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	None	Extended
BP	GO:1903428	positive regulation of reactive oxygen species biosynthetic process	IEA	AHRD
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2000379	positive regulation of reactive oxygen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005622	intracellular anatomical structure	IEP	Predict GO terms from Neighborhoods
CC	GO:0009534	chloroplast thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009782	photosystem I antenna complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0009979	16:0 monogalactosyldiacylglycerol desaturase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010019	chloroplast-nucleus signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010205	photoinhibition	IEP	Predict GO terms from Neighborhoods
BP	GO:0010207	photosystem II assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0010242	oxygen evolving activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010271	regulation of chlorophyll catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010374	stomatal complex development	IEP	Predict GO terms from Neighborhoods
CC	GO:0030093	chloroplast photosystem I	IEP	Predict GO terms from Neighborhoods
CC	GO:0030095	chloroplast photosystem II	IEP	Predict GO terms from Neighborhoods
CC	GO:0030096	plasma membrane-derived thylakoid photosystem II	IEP	Predict GO terms from Neighborhoods
MF	GO:0031409	pigment binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031976	plastid thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0042389	omega-3 fatty acid desaturase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0042549	photosystem II stabilization	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0043155	negative regulation of photosynthesis, light reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0102657	1-18:1-2-16:0-monogalactosyldiacylglycerol palmitoyl-lipid 7-desaturase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102843	1-18:2-2-16:0-monogalactosyldiacylglycerol desaturase activity (SN2-16:1 forming)	IEP	Predict GO terms from Neighborhoods
BP	GO:1901402	negative regulation of tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901404	regulation of tetrapyrrole catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901405	negative regulation of tetrapyrrole catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903647	negative regulation of chlorophyll catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905156	negative regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR022796	Chloroa_b-bind	66	231

External Links

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SOLTUB.AGRIA.G00000025203

Expression Profile

Co-expression Networks

Functional Annotation