SOLTUB.AGRIA.G00000025411

Description : Cyclin family protein

Gene families : OG_02_0009882 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025411
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_207

Type	GO Term	Name	Evidence	Source
CC	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	IEA	AHRD
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	IEA	AHRD
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043229	intracellular organelle	IEA	AHRD
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEA	AHRD
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051726	regulation of cell cycle	IEA	AHRD
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	IEA	AHRD
BP	GO:0070873	regulation of glycogen metabolic process	IEA	AHRD
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0002683	negative regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002832	negative regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003682	chromatin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005829	cytosol	IEP	Predict GO terms from Neighborhoods
BP	GO:0005984	disaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005985	sucrose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005986	sucrose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005996	monosaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006000	fructose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006002	fructose 6-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006006	glucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Predict GO terms from Neighborhoods
BP	GO:0006094	gluconeogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009311	oligosaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009639	response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009640	photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009642	response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009646	response to absence of light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009647	skotomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009743	response to carbohydrate	IEP	Predict GO terms from Neighborhoods
BP	GO:0009746	response to hexose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009750	response to fructose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	Predict GO terms from Neighborhoods
BP	GO:0010051	xylem and phloem pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010087	phloem or xylem histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010208	pollen wall assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0010319	stromule	IEP	Predict GO terms from Neighborhoods
BP	GO:0010528	regulation of transposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0010529	negative regulation of transposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016311	dephosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019253	reductive pentose-phosphate cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0019318	hexose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019319	hexose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019685	photosynthesis, dark reaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0030388	fructose 1,6-bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031056	regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031057	negative regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031058	positive regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031060	regulation of histone methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031062	positive regulation of histone methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031348	negative regulation of defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0031400	negative regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031401	positive regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031490	chromatin DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032102	negative regulation of response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0034284	response to monosaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035065	regulation of histone acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035067	negative regulation of histone acetylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042826	histone deacetylase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043621	protein self-association	IEP	Predict GO terms from Neighborhoods
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045088	regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045824	negative regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0050308	sugar-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050777	negative regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0051570	regulation of histone H3-K9 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051574	positive regulation of histone H3-K9 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Predict GO terms from Neighborhoods
BP	GO:1900109	regulation of histone H3-K9 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900111	positive regulation of histone H3-K9 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900424	regulation of defense response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:1900425	negative regulation of defense response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:1901983	regulation of protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901984	negative regulation of protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:2000756	regulation of peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000757	negative regulation of peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	28	178
IPR036915	Cyclin-like_sf	88	179

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SOLTUB.AGRIA.G00000025411

Expression Profile

Co-expression Networks

Functional Annotation