SOLTUB.AGRIA.G00000025465


Description : Zinc finger, B-box


Gene families : OG_02_0015813 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025465
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_19


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0007623 circadian rhythm IEA AHRD
BP GO:0009640 photomorphogenesis IEA AHRD
BP GO:0009658 chloroplast organization IEA AHRD
BP GO:0009785 blue light signaling pathway IEA AHRD
BP GO:0009909 regulation of flower development IEA AHRD
BP GO:0010017 red or far-red light signaling pathway IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010224 response to UV-B IEA AHRD
BP GO:0010629 negative regulation of gene expression IEA AHRD
MF GO:0030674 protein-macromolecule adaptor activity IEA AHRD
BP GO:0045892 negative regulation of DNA-templated transcription IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEA AHRD
BP GO:2000032 regulation of secondary shoot formation IEA AHRD
Type GO Term Name Evidence Source
BP GO:0002757 immune response-activating signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0002758 innate immune response-activating signal transduction IEP Predict GO terms from Neighborhoods
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0006557 obsolete S-adenosylmethioninamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006576 cellular biogenic amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006595 polyamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006596 polyamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006597 spermine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0008215 spermine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008216 spermidine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008295 spermidine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009595 detection of biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009641 shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:0009649 entrainment of circadian clock IEP Predict GO terms from Neighborhoods
BP GO:0010018 far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010073 meristem maintenance IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010114 response to red light IEP Predict GO terms from Neighborhoods
BP GO:0010161 red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010218 response to far red light IEP Predict GO terms from Neighborhoods
BP GO:0010359 regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0016032 viral process IEP Predict GO terms from Neighborhoods
BP GO:0016045 detection of bacterium IEP Predict GO terms from Neighborhoods
BP GO:0016458 obsolete gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0019079 viral genome replication IEP Predict GO terms from Neighborhoods
MF GO:0019199 transmembrane receptor protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0022898 regulation of transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032409 regulation of transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0032541 cortical endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0032922 circadian regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Predict GO terms from Neighborhoods
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042752 regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
BP GO:0044070 regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:0044106 cellular amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045036 protein targeting to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0048576 positive regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048584 positive regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
BP GO:0071490 cellular response to far red light IEP Predict GO terms from Neighborhoods
BP GO:0071491 cellular response to red light IEP Predict GO terms from Neighborhoods
CC GO:0071782 endoplasmic reticulum tubular network IEP Predict GO terms from Neighborhoods
BP GO:0072596 establishment of protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0072598 protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0098543 detection of other organism IEP Predict GO terms from Neighborhoods
BP GO:0098581 detection of external biotic stimulus IEP Predict GO terms from Neighborhoods
CC GO:0098827 endoplasmic reticulum subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
BP GO:1900426 positive regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1903959 regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:1990578 perinuclear endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:2000030 regulation of response to red or far red light IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000315 Znf_B-box 2 42
No external refs found!