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  5. SOLTUB.AGRIA.G00000000243

SOLTUB.AGRIA.G00000000243


Description : Phytoene synthase, chloroplastic


Gene families : OG_02_0011820 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000243
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_122


Type GO Term Name Evidence Source
MF GO:0004311 farnesyltranstransferase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0009575 chromoplast stroma IEA AHRD
CC GO:0010287 plastoglobule IEA AHRD
BP GO:0016117 carotenoid biosynthetic process IEA AHRD
BP GO:0016120 carotene biosynthetic process IEA AHRD
MF GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity IEA AHRD
CC GO:0031969 chloroplast membrane IEA AHRD
MF GO:0046905 15-cis-phytoene synthase activity IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000024 maltose biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0000153 cytoplasmic ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0000323 lytic vacuole IEP Predict GO terms from Neighborhoods
MF GO:0003846 2-acylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004017 adenylate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004321 fatty-acyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004622 lysophospholipase activity IEP Predict GO terms from Neighborhoods
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005347 ATP transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005471 ATP:ADP antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005518 collagen binding IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
CC GO:0005764 lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005901 caveola IEP Predict GO terms from Neighborhoods
BP GO:0005983 starch catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007519 skeletal muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008728 GTP diphosphokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity IEP Predict GO terms from Neighborhoods
CC GO:0009528 plastid inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0009543 chloroplast thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009661 chromoplast organization IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009706 chloroplast inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0009804 coumarin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009805 coumarin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009820 alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009908 flower development IEP Predict GO terms from Neighborhoods
BP GO:0010154 fruit development IEP Predict GO terms from Neighborhoods
BP GO:0010271 regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predict GO terms from Neighborhoods
BP GO:0010439 regulation of glucosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0014075 response to amine IEP Predict GO terms from Neighborhoods
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015217 ADP transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015866 ADP transport IEP Predict GO terms from Neighborhoods
BP GO:0015867 ATP transport IEP Predict GO terms from Neighborhoods
BP GO:0015949 nucleobase-containing small molecule interconversion IEP Predict GO terms from Neighborhoods
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015970 guanosine tetraphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015996 chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016137 glycoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016138 glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Predict GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Predict GO terms from Neighborhoods
MF GO:0016207 4-coumarate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016408 C-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predict GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predict GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Predict GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016778 diphosphotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016794 diphosphoric monoester hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0018858 benzoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0030574 collagen catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030891 VCB complex IEP Predict GO terms from Neighborhoods
MF GO:0030984 kininogen binding IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
CC GO:0031978 plastid thylakoid lumen IEP Predict GO terms from Neighborhoods
MF GO:0032441 pheophorbide a oxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0032963 collagen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033015 tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033494 ferulate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034036 purine ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
CC GO:0042383 sarcolemma IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042762 regulation of sulfur metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0043394 proteoglycan binding IEP Predict GO terms from Neighborhoods
BP GO:0044111 formation of structure involved in a symbiotic process IEP Predict GO terms from Neighborhoods
BP GO:0044114 development of symbiont in host IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044853 plasma membrane raft IEP Predict GO terms from Neighborhoods
CC GO:0045169 fusome IEP Predict GO terms from Neighborhoods
BP GO:0046149 pigment catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046461 neutral lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046464 acylglycerol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046662 regulation of oviposition IEP Predict GO terms from Neighborhoods
BP GO:0046697 decidualization IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047084 methyltetrahydroprotoberberine 14-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0047087 protopine 6-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0047254 2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048446 petal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048521 negative regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0048564 photosystem I assembly IEP Predict GO terms from Neighborhoods
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0050563 trans-feruloyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
MF GO:0062131 3-butenylglucosinolate 2-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0070670 response to interleukin-4 IEP Predict GO terms from Neighborhoods
BP GO:0071260 cellular response to mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071281 cellular response to iron ion IEP Predict GO terms from Neighborhoods
BP GO:0071480 cellular response to gamma radiation IEP Predict GO terms from Neighborhoods
MF GO:0080124 pheophytinase activity IEP Predict GO terms from Neighborhoods
BP GO:0080186 developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:0085014 dormancy entry of symbiont in host IEP Predict GO terms from Neighborhoods
MF GO:0090430 caffeoyl-CoA: alcohol caffeoyl transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0097007 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0097008 (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0097066 response to thyroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0097067 cellular response to thyroid hormone stimulus IEP Predict GO terms from Neighborhoods
MF GO:0102229 amylopectin maltohydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0106144 fraxetin 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0106146 sideretin biosynthesis IEP Predict GO terms from Neighborhoods
MF GO:0106149 indole-3-carbonyl nitrile 4-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0106286 (E)-caffeate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0106290 trans-cinnamate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0120254 olefinic compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0140323 solute:anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900992 (-)-secologanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900994 (-)-secologanin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901045 negative regulation of oviposition IEP Predict GO terms from Neighborhoods
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901402 negative regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901405 negative regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901804 beta-glucoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901806 beta-glucoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903647 negative regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904143 positive regulation of carotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002060 Squ/phyt_synthse 337 457
IPR008949 Isoprenoid_synthase_dom_sf 336 510
No external refs found!