SOLTUB.AGRIA.G00000025943

Description : Peptide methionine sulfoxide reductase msrB

Gene families : OG_02_0022966 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025943
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_50

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	None	Extended
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030091	protein repair	IEA	AHRD
BP	GO:0033554	cellular response to stress	None	Extended
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEA	AHRD
BP	GO:0034599	cellular response to oxidative stress	IEA	AHRD
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901530	response to hypochlorite	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000731	DNA synthesis involved in DNA repair	IEP	Predict GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006301	postreplication repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006743	ubiquinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006744	ubiquinone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006954	inflammatory response	IEP	Predict GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008236	serine-type peptidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009368	endopeptidase Clp complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009941	chloroplast envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0010190	cytochrome b6f complex assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0010287	plastoglobule	IEP	Predict GO terms from Neighborhoods
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	IEP	Predict GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0017171	serine hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018884	carbazole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019985	translesion synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031967	organelle envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031975	envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0033614	chloroplast proton-transporting ATP synthase complex assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042178	xenobiotic catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042246	tissue regeneration	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0043461	proton-transporting ATP synthase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0046232	carbazole catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048564	photosystem I assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0051117	ATPase binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0070987	error-free translesion synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0097428	protein maturation by iron-sulfur cluster transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:1901004	ubiquinone-6 metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901006	ubiquinone-6 biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901334	lactone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901336	lactone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901600	strigolactone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901601	strigolactone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901661	quinone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901663	quinone biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002579	Met_Sox_Rdtase_MsrB_dom	78	197
IPR011057	Mss4-like_sf	74	197
IPR002579	Met_Sox_Rdtase_MsrB_dom	74	197

External Links

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SOLTUB.AGRIA.G00000025943

Expression Profile

Co-expression Networks

Functional Annotation