SOLTUB.AGRIA.G00000026040

Description : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Gene families : OG_02_0015922 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026040
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_6

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006023	aminoglycan biosynthetic process	None	Extended
BP	GO:0006024	glycosaminoglycan biosynthetic process	IEA	AHRD
BP	GO:0006029	proteoglycan metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009100	glycoprotein metabolic process	None	Extended
BP	GO:0009101	glycoprotein biosynthetic process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015020	glucuronosyltransferase activity	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016049	cell growth	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030166	proteoglycan biosynthetic process	IEA	AHRD
BP	GO:0030203	glycosaminoglycan metabolic process	None	Extended
CC	GO:0031090	organelle membrane	IEA	AHRD
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0040007	growth	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048731	system development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050654	chondroitin sulfate proteoglycan metabolic process	IEA	AHRD
BP	GO:0050896	response to stimulus	IEA	AHRD
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903510	mucopolysaccharide metabolic process	IEA	AHRD

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002084	protein depalmitoylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002215	defense response to nematode	IEP	Predict GO terms from Neighborhoods
BP	GO:0002697	regulation of immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002699	positive regulation of immune effector process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006076	(1->3)-beta-D-glucan catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006997	nucleus organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007000	nucleolus organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007154	cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0007231	osmosensory signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007611	learning or memory	IEP	Predict GO terms from Neighborhoods
BP	GO:0007612	learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0008272	sulfate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008306	associative learning	IEP	Predict GO terms from Neighborhoods
MF	GO:0008422	beta-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008474	palmitoyl-(protein) hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009251	glucan catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009292	horizontal gene transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0009294	DNA-mediated transformation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009612	response to mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009652	thigmotropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009830	cell wall modification involved in abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009901	anther dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0009970	cellular response to sulfate starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010047	fruit dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010227	floral organ abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0010507	negative regulation of autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0010955	negative regulation of protein processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0015926	glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016208	AMP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0016241	regulation of macroautophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016242	negative regulation of macroautophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0016485	protein processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0016578	histone deubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0016579	protein deubiquitination	IEP	Predict GO terms from Neighborhoods
CC	GO:0016604	nuclear body	IEP	Predict GO terms from Neighborhoods
CC	GO:0016607	nuclear speck	IEP	Predict GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016790	thiolester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019902	phosphatase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019903	protein phosphatase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031057	negative regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031063	regulation of histone deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031064	negative regulation of histone deacetylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0031225	anchored component of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031302	intrinsic component of endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031344	regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031667	response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0032387	negative regulation of intracellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032880	regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0033157	regulation of intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034260	negative regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0035601	protein deacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0039531	regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0039533	regulation of MDA-5 signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0039535	regulation of RIG-I signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0042157	lipoprotein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042159	lipoprotein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042594	response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042595	behavioral response to starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043087	regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043547	positive regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044275	cellular carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044277	cell wall disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045490	pectin catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0046658	anchored component of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0047484	regulation of response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0048235	pollen sperm cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050688	regulation of defense response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050691	regulation of defense response to virus by host	IEP	Predict GO terms from Neighborhoods
BP	GO:0050807	regulation of synapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050890	cognition	IEP	Predict GO terms from Neighborhoods
MF	GO:0051019	mitogen-activated protein kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051170	import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051224	negative regulation of protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051273	beta-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051275	beta-glucan catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051345	positive regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0055038	recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0060341	regulation of cellular localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060491	regulation of cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0062207	regulation of pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0062208	positive regulation of pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0070536	protein K63-linked deubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0070613	regulation of protein processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0070646	protein modification by small protein removal	IEP	Predict GO terms from Neighborhoods
BP	GO:0071108	protein K48-linked deubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071586	CAAX-box protein processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0071683	sensory dendrite	IEP	Predict GO terms from Neighborhoods
BP	GO:0071947	protein deubiquitination involved in ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072348	sulfur compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090311	regulation of protein deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090313	regulation of protein targeting to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090315	negative regulation of protein targeting to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090317	negative regulation of intracellular protein transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0098599	palmitoyl hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098732	macromolecule deacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098734	macromolecule depalmitoylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0098936	intrinsic component of postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098948	intrinsic component of postsynaptic specialization membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098949	intrinsic component of postsynaptic endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098951	intrinsic component of postsynaptic recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099025	anchored component of postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099030	anchored component of postsynaptic specialization membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099031	anchored component of postsynaptic density membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099033	anchored component of postsynaptic recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099034	anchored component of postsynaptic endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099144	anchored component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099146	intrinsic component of postsynaptic density membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0099175	regulation of postsynapse organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0099240	intrinsic component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0110030	regulation of G2/MI transition of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0120032	regulation of plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120035	regulation of plasma membrane bounded cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1900027	regulation of ruffle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1900245	positive regulation of MDA-5 signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1900246	positive regulation of RIG-I signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901000	regulation of response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901993	regulation of meiotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902473	regulation of protein localization to synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902816	regulation of protein localization to microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:1902817	negative regulation of protein localization to microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:1902950	regulation of dendritic spine maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:1903317	regulation of protein maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903318	negative regulation of protein maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903533	regulation of protein targeting	IEP	Predict GO terms from Neighborhoods
BP	GO:1903828	negative regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1904950	negative regulation of establishment of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1905475	regulation of protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1905476	negative regulation of protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1905666	regulation of protein localization to endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:1905668	positive regulation of protein localization to endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:2000232	regulation of rRNA processing	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003406	Glyco_trans_14	77	336

External Links

No external refs found!

SOLTUB.AGRIA.G00000026040

Expression Profile

Co-expression Networks

Functional Annotation