SOLTUB.AGRIA.G00000026417

Description : Chloride channel protein

Gene families : OG_02_0020453 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026417
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000026414	No alias	Chloride channel protein	0.04	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000026414	No alias	Chloride channel protein	0.04	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000026414	No alias	Chloride channel protein	0.04	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005244	voltage-gated ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	AHRD
MF	GO:0005253	anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated anion channel activity	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034702	ion channel complex	None	Extended
CC	GO:0034707	chloride channel complex	IEA	AHRD
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000323	lytic vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0001570	vasculogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002119	nematode larval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002164	larval development	IEP	Predict GO terms from Neighborhoods
MF	GO:0003756	protein disulfide isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004301	epoxide hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004930	G protein-coupled receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Predict GO terms from Neighborhoods
CC	GO:0005677	chromatin silencing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005764	lysosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005869	dynactin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006605	protein targeting	IEP	Predict GO terms from Neighborhoods
BP	GO:0006622	protein targeting to lysosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006777	Mo-molybdopterin cofactor biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006907	pinocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006954	inflammatory response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007033	vacuole organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007040	lysosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007272	ensheathment of neurons	IEP	Predict GO terms from Neighborhoods
BP	GO:0007286	spermatid development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008088	axo-dendritic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008089	anterograde axonal transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008265	Mo-molybdopterin cofactor sulfurase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008333	endosome to lysosome transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008366	axon ensheathment	IEP	Predict GO terms from Neighborhoods
MF	GO:0008502	melatonin receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009000	selenocysteine lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009408	response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:0009687	abscisic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009688	abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009700	indole phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009888	tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009942	longitudinal axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010048	vernalization response	IEP	Predict GO terms from Neighborhoods
BP	GO:0010120	camalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010656	negative regulation of muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010660	regulation of muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010662	regulation of striated muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010664	negative regulation of striated muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010665	regulation of cardiac muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010667	negative regulation of cardiac muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010976	positive regulation of neuron projection development	IEP	Predict GO terms from Neighborhoods
BP	GO:0014013	regulation of gliogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0014015	positive regulation of gliogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0014028	notochord formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0014866	skeletal myofibril assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016783	sulfurtransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016801	hydrolase activity, acting on ether bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016803	ether hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Predict GO terms from Neighborhoods
BP	GO:0016925	protein sumoylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016971	flavin-linked sulfhydryl oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016972	thiol oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018315	molybdenum incorporation into molybdenum-molybdopterin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0019236	response to pheromone	IEP	Predict GO terms from Neighborhoods
BP	GO:0019720	Mo-molybdopterin cofactor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030010	establishment of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030029	actin filament-based process	IEP	Predict GO terms from Neighborhoods
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030123	AP-3 adaptor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030131	clathrin adaptor complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0030151	molybdenum ion binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030173	integral component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0030239	myofibril assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0030662	coated vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030665	clathrin-coated vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031032	actomyosin structure organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031201	SNARE complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0031435	mitogen-activated protein kinase kinase kinase binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031519	PcG protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034605	cellular response to heat	IEP	Predict GO terms from Neighborhoods
MF	GO:0035064	methylated histone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035519	protein K29-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0039020	pronephric nephron tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0042040	metal incorporation into metallo-molybdopterin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0042552	myelination	IEP	Predict GO terms from Neighborhoods
BP	GO:0042759	long-chain fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043157	response to cation stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0043268	positive regulation of potassium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043288	apocarotenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044314	protein K27-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0045036	protein targeting to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0045037	protein import into chloroplast stroma	IEP	Predict GO terms from Neighborhoods
BP	GO:0045597	positive regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045685	regulation of glial cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045687	positive regulation of glial cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046217	indole phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0047496	vesicle transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0048255	mRNA stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0048489	synaptic vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048490	anterograde synaptic vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048577	negative regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048713	regulation of oligodendrocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048714	positive regulation of oligodendrocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051189	prosthetic group metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051569	regulation of histone H3-K4 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051571	positive regulation of histone H3-K4 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051574	positive regulation of histone H3-K9 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0052317	camalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060034	notochord cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061085	regulation of histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061087	positive regulation of histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061326	renal tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061462	protein localization to lysosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0061631	ubiquitin conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061650	ubiquitin-like protein conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070370	cellular heat acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070534	protein K63-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
MF	GO:0070628	proteasome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070979	protein K11-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0071629	cytoplasm protein quality control by the ubiquitin-proteasome system	IEP	Predict GO terms from Neighborhoods
BP	GO:0072009	nephron epithelium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072073	kidney epithelium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072080	nephron tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072344	rescue of stalled ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0072384	organelle transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0072598	protein localization to chloroplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0072671	mitochondria-associated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080171	lytic vacuole organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0085020	protein K6-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0097479	synaptic vesicle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0097501	stress response to metal ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0098930	axonal transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0099514	synaptic vesicle cytoskeletal transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0099517	synaptic vesicle transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0099518	vesicle cytoskeletal trafficking	IEP	Predict GO terms from Neighborhoods
MF	GO:0102867	molybdenum cofactor sulfurtransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0120254	olefinic compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0140034	methylation-dependent protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0140455	cytoplasm protein quality control	IEP	Predict GO terms from Neighborhoods
BP	GO:1900109	regulation of histone H3-K9 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900111	positive regulation of histone H3-K9 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902373	negative regulation of mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902644	tertiary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904368	regulation of sclerenchyma cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904369	positive regulation of sclerenchyma cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:1904408	melatonin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1990116	ribosome-associated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990170	stress response to cadmium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:2000028	regulation of photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000644	CBS_dom	670	701
IPR000644	CBS_dom	578	632
IPR014743	Cl-channel_core	87	512
IPR001807	Cl-channel_volt-gated	186	507

External Links

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SOLTUB.AGRIA.G00000026417

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation