SOLTUB.AGRIA.G00000026418


Description : WRKY family transcription factor family protein


Gene families : OG_02_0020454 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026418
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_96


Type GO Term Name Evidence Source
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0009409 response to cold IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0009555 pollen development IEA AHRD
BP GO:0009627 systemic acquired resistance IEA AHRD
BP GO:0009651 response to salt stress IEA AHRD
BP GO:0009723 response to ethylene IEA AHRD
BP GO:0009753 response to jasmonic acid IEA AHRD
BP GO:0009832 plant-type cell wall biogenesis IEA AHRD
BP GO:0009846 pollen germination IEA AHRD
BP GO:0009863 salicylic acid mediated signaling pathway IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
BP GO:0009942 longitudinal axis specification IEA AHRD
BP GO:0009960 endosperm development IEA AHRD
BP GO:0010120 camalexin biosynthetic process IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010508 positive regulation of autophagy IEA AHRD
MF GO:0016740 transferase activity IEA AHRD
BP GO:0030010 establishment of cell polarity IEA AHRD
BP GO:0042659 regulation of cell fate specification IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
BP GO:0070370 cellular heat acclimation IEA AHRD
BP GO:1900057 positive regulation of leaf senescence IEA AHRD
BP GO:1900150 regulation of defense response to fungus IEA AHRD
BP GO:1900425 negative regulation of defense response to bacterium IEA AHRD
BP GO:1901141 regulation of lignin biosynthetic process IEA AHRD
BP GO:1904369 positive regulation of sclerenchyma cell differentiation IEA AHRD
BP GO:1990170 stress response to cadmium ion IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0001570 vasculogenesis IEP Predict GO terms from Neighborhoods
CC GO:0001650 fibrillar center IEP Predict GO terms from Neighborhoods
BP GO:0001676 long-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0001750 photoreceptor outer segment IEP Predict GO terms from Neighborhoods
CC GO:0001917 photoreceptor inner segment IEP Predict GO terms from Neighborhoods
MF GO:0004301 epoxide hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004707 MAP kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005200 structural constituent of cytoskeleton IEP Predict GO terms from Neighborhoods
MF GO:0005244 voltage-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005247 voltage-gated chloride channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005253 anion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005254 chloride channel activity IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005815 microtubule organizing center IEP Predict GO terms from Neighborhoods
CC GO:0005869 dynactin complex IEP Predict GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Predict GO terms from Neighborhoods
CC GO:0005930 axoneme IEP Predict GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Predict GO terms from Neighborhoods
BP GO:0006954 inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007272 ensheathment of neurons IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008308 voltage-gated anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0008366 axon ensheathment IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010656 negative regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010660 regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010662 regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010664 negative regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010665 regulation of cardiac muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010667 negative regulation of cardiac muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010970 transport along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0010976 positive regulation of neuron projection development IEP Predict GO terms from Neighborhoods
BP GO:0014013 regulation of gliogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014015 positive regulation of gliogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014028 notochord formation IEP Predict GO terms from Neighborhoods
BP GO:0014866 skeletal myofibril assembly IEP Predict GO terms from Neighborhoods
MF GO:0015108 chloride transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Predict GO terms from Neighborhoods
MF GO:0016803 ether hydrolase activity IEP Predict GO terms from Neighborhoods
CC GO:0019897 extrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Predict GO terms from Neighborhoods
BP GO:0030029 actin filament-based process IEP Predict GO terms from Neighborhoods
BP GO:0030239 myofibril assembly IEP Predict GO terms from Neighborhoods
CC GO:0030496 midbody IEP Predict GO terms from Neighborhoods
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0031032 actomyosin structure organization IEP Predict GO terms from Neighborhoods
BP GO:0031344 regulation of cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0031345 negative regulation of cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0031346 positive regulation of cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0031503 protein-containing complex localization IEP Predict GO terms from Neighborhoods
CC GO:0031514 motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0032391 photoreceptor connecting cilium IEP Predict GO terms from Neighborhoods
BP GO:0033120 positive regulation of RNA splicing IEP Predict GO terms from Neighborhoods
CC GO:0034702 ion channel complex IEP Predict GO terms from Neighborhoods
CC GO:0034707 chloride channel complex IEP Predict GO terms from Neighborhoods
BP GO:0035720 intraciliary anterograde transport IEP Predict GO terms from Neighborhoods
BP GO:0035721 intraciliary retrograde transport IEP Predict GO terms from Neighborhoods
CC GO:0035869 ciliary transition zone IEP Predict GO terms from Neighborhoods
CC GO:0036064 ciliary basal body IEP Predict GO terms from Neighborhoods
BP GO:0042073 intraciliary transport IEP Predict GO terms from Neighborhoods
BP GO:0042552 myelination IEP Predict GO terms from Neighborhoods
BP GO:0042759 long-chain fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043489 RNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0045494 photoreceptor cell maintenance IEP Predict GO terms from Neighborhoods
BP GO:0045685 regulation of glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045687 positive regulation of glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045724 positive regulation of cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048026 positive regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048255 mRNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048713 regulation of oligodendrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048714 positive regulation of oligodendrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050685 positive regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0060034 notochord cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0060491 regulation of cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0070316 regulation of G0 to G1 transition IEP Predict GO terms from Neighborhoods
BP GO:0070317 negative regulation of G0 to G1 transition IEP Predict GO terms from Neighborhoods
CC GO:0071013 catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0072686 mitotic spindle IEP Predict GO terms from Neighborhoods
MF GO:0097472 cyclin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0097542 ciliary tip IEP Predict GO terms from Neighborhoods
CC GO:0097546 ciliary base IEP Predict GO terms from Neighborhoods
BP GO:0099111 microtubule-based transport IEP Predict GO terms from Neighborhoods
BP GO:0120032 regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120033 negative regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120034 positive regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120035 regulation of plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:1902017 regulation of cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902018 negative regulation of cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902115 regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902116 negative regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902117 positive regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902369 negative regulation of RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902373 negative regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Predict GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1902855 regulation of non-motile cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902856 negative regulation of non-motile cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902857 positive regulation of non-motile cilium assembly IEP Predict GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1905744 regulation of mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:1905746 positive regulation of mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003657 WRKY_dom 323 379
IPR003657 WRKY_dom 539 596
IPR036576 WRKY_dom_sf 321 381
IPR036576 WRKY_dom_sf 530 598
No external refs found!