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  5. SOLTUB.AGRIA.G00000026802

SOLTUB.AGRIA.G00000026802


Description : B3 domain-containing protein rem17


Gene families : OG_02_0001906 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026802
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_44


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000794 condensed nuclear chromosome IEP Predict GO terms from Neighborhoods
BP GO:0002931 response to ischemia IEP Predict GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005782 peroxisomal matrix IEP Predict GO terms from Neighborhoods
BP GO:0006085 acetyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006109 regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006195 purine nucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006814 sodium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0007166 cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007346 regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0008139 nuclear localization sequence binding IEP Predict GO terms from Neighborhoods
BP GO:0009154 purine ribonucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009166 nucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009261 ribonucleotide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009524 phragmoplast IEP Predict GO terms from Neighborhoods
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009856 pollination IEP Predict GO terms from Neighborhoods
BP GO:0010248 establishment or maintenance of transmembrane electrochemical gradient IEP Predict GO terms from Neighborhoods
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010906 regulation of glucose metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0012505 endomembrane system IEP Predict GO terms from Neighborhoods
MF GO:0015081 sodium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0019364 pyridine nucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019677 NAD catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031514 motile cilium IEP Predict GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Predict GO terms from Neighborhoods
CC GO:0031907 microbody lumen IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0031998 regulation of fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
BP GO:0032490 detection of molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0032497 detection of lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033869 nucleoside bisphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034031 ribonucleoside bisphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034034 purine nucleoside bisphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035384 thioester biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035725 sodium ion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0038187 pattern recognition receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044273 sulfur compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Predict GO terms from Neighborhoods
BP GO:0046320 regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046321 positive regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048317 seed morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048366 leaf development IEP Predict GO terms from Neighborhoods
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0050135 NAD(P)+ nucleosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0050994 regulation of lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Predict GO terms from Neighborhoods
BP GO:0060188 regulation of protein desumoylation IEP Predict GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0071616 acyl-CoA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072523 purine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072526 pyridine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predict GO terms from Neighborhoods
BP GO:1901292 nucleoside phosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001293 malonyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001294 malonyl-CoA catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR015300 DNA-bd_pseudobarrel_sf 191 283
IPR003340 B3_DNA-bd 448 532
IPR003340 B3_DNA-bd 576 665
IPR003340 B3_DNA-bd 90 162
IPR003340 B3_DNA-bd 327 404
IPR003340 B3_DNA-bd 199 278
IPR015300 DNA-bd_pseudobarrel_sf 569 666
IPR015300 DNA-bd_pseudobarrel_sf 82 168
IPR015300 DNA-bd_pseudobarrel_sf 314 411
IPR015300 DNA-bd_pseudobarrel_sf 440 539
No external refs found!