Coexpression cluster: Cluster_44 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030877 beta-catenin destruction complex 4.69% (3/64) 6.93 2e-06 0.002875
GO:0014072 response to isoquinoline alkaloid 4.69% (3/64) 5.63 3.1e-05 0.005982
GO:0043278 response to morphine 4.69% (3/64) 5.63 3.1e-05 0.005982
GO:0035567 non-canonical Wnt signaling pathway 3.12% (2/64) 7.93 2.6e-05 0.006713
GO:0045095 keratin filament 3.12% (2/64) 7.93 2.6e-05 0.006713
GO:0060069 Wnt signaling pathway, regulating spindle positioning 3.12% (2/64) 7.93 2.6e-05 0.006713
GO:0061172 regulation of establishment of bipolar cell polarity 3.12% (2/64) 8.25 1.6e-05 0.008064
GO:1904846 negative regulation of establishment of bipolar cell polarity 3.12% (2/64) 8.25 1.6e-05 0.008064
GO:2000114 regulation of establishment of cell polarity 4.69% (3/64) 5.32 6e-05 0.008411
GO:1903066 regulation of protein localization to cell tip 3.12% (2/64) 7.45 5.5e-05 0.00844
GO:1903067 negative regulation of protein localization to cell tip 3.12% (2/64) 7.45 5.5e-05 0.00844
GO:0071216 cellular response to biotic stimulus 6.25% (4/64) 4.19 7.2e-05 0.009126
GO:0090090 negative regulation of canonical Wnt signaling pathway 4.69% (3/64) 5.11 9.2e-05 0.010893
GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process 6.25% (4/64) 3.9 0.000156 0.01257
GO:0002220 innate immune response activating cell surface receptor signaling pathway 3.12% (2/64) 6.8 0.000144 0.012948
GO:0002752 cell surface pattern recognition receptor signaling pathway 3.12% (2/64) 6.8 0.000144 0.012948
GO:0032499 detection of peptidoglycan 3.12% (2/64) 6.8 0.000144 0.012948
GO:2001080 chitosan binding 3.12% (2/64) 6.8 0.000144 0.012948
GO:0032490 detection of molecule of bacterial origin 4.69% (3/64) 4.8 0.000178 0.012974
GO:0005849 mRNA cleavage factor complex 4.69% (3/64) 4.82 0.00017 0.013019
GO:0007166 cell surface receptor signaling pathway 9.38% (6/64) 2.9 0.000154 0.01312
GO:0010845 positive regulation of reciprocal meiotic recombination 3.12% (2/64) 6.55 0.000203 0.014159
GO:0140535 intracellular protein-containing complex 12.5% (8/64) 2.27 0.000246 0.015686
GO:0032494 response to peptidoglycan 3.12% (2/64) 6.45 0.000237 0.015784
GO:0032878 regulation of establishment or maintenance of cell polarity 4.69% (3/64) 4.55 0.000292 0.017866
GO:0032491 detection of molecule of fungal origin 3.12% (2/64) 6.25 0.000312 0.018374
GO:0008139 nuclear localization sequence binding 3.12% (2/64) 6.01 0.000443 0.024236
GO:1903052 positive regulation of proteolysis involved in protein catabolic process 6.25% (4/64) 3.51 0.000429 0.024335
GO:0044732 mitotic spindle pole body 3.12% (2/64) 5.73 0.000653 0.030296
GO:0045103 intermediate filament-based process 3.12% (2/64) 5.73 0.000653 0.030296
GO:0045104 intermediate filament cytoskeleton organization 3.12% (2/64) 5.73 0.000653 0.030296
GO:0030178 negative regulation of Wnt signaling pathway 4.69% (3/64) 4.14 0.000678 0.030508
GO:0009593 detection of chemical stimulus 6.25% (4/64) 3.4 0.000581 0.030684
GO:0043279 response to alkaloid 4.69% (3/64) 4.17 0.00064 0.032676
GO:0001837 epithelial to mesenchymal transition 3.12% (2/64) 5.55 0.000836 0.032827
GO:0002429 immune response-activating cell surface receptor signaling pathway 3.12% (2/64) 5.55 0.000836 0.032827
GO:0045836 positive regulation of meiotic nuclear division 3.12% (2/64) 5.61 0.000773 0.032861
GO:1901565 organonitrogen compound catabolic process 12.5% (8/64) 1.99 0.000859 0.032874
GO:0016055 Wnt signaling pathway 3.12% (2/64) 5.5 0.000902 0.032886
GO:1905114 cell surface receptor signaling pathway involved in cell-cell signaling 3.12% (2/64) 5.5 0.000902 0.032886
GO:0045732 positive regulation of protein catabolic process 6.25% (4/64) 3.27 0.000803 0.033225
GO:2000058 regulation of ubiquitin-dependent protein catabolic process 6.25% (4/64) 3.29 0.000768 0.0336
GO:0005882 intermediate filament 3.12% (2/64) 5.4 0.001041 0.037076
GO:0002768 immune response-regulating cell surface receptor signaling pathway 3.12% (2/64) 5.35 0.001115 0.037094
GO:0010520 regulation of reciprocal meiotic recombination 3.12% (2/64) 5.35 0.001115 0.037094
GO:1904424 regulation of GTP binding 3.12% (2/64) 5.35 0.001115 0.037094
GO:0002221 pattern recognition receptor signaling pathway 6.25% (4/64) 3.09 0.001279 0.039972
GO:0048762 mesenchymal cell differentiation 3.12% (2/64) 5.25 0.001268 0.040448
GO:0051606 detection of stimulus 7.81% (5/64) 2.62 0.00134 0.041042
GO:0070507 regulation of microtubule cytoskeleton organization 4.69% (3/64) 3.83 0.001263 0.041142
GO:0060188 regulation of protein desumoylation 1.56% (1/64) 9.25 0.001637 0.04322
GO:0050080 malonyl-CoA decarboxylase activity 1.56% (1/64) 9.25 0.001637 0.04322
GO:0021551 central nervous system morphogenesis 1.56% (1/64) 9.25 0.001637 0.04322
GO:1900016 negative regulation of cytokine production involved in inflammatory response 1.56% (1/64) 9.25 0.001637 0.04322
GO:0061938 protein localization to somatodendritic compartment 1.56% (1/64) 9.25 0.001637 0.04322
GO:0045862 positive regulation of proteolysis 6.25% (4/64) 2.96 0.001756 0.044085
GO:0060828 regulation of canonical Wnt signaling pathway 4.69% (3/64) 3.67 0.001731 0.044162
GO:0002237 response to molecule of bacterial origin 7.81% (5/64) 2.59 0.001476 0.044298
GO:1903050 regulation of proteolysis involved in protein catabolic process 6.25% (4/64) 2.97 0.001716 0.044528
GO:0019538 protein metabolic process 28.12% (18/64) 1.06 0.001516 0.044649
GO:0036211 protein modification process 23.44% (15/64) 1.2 0.001606 0.046407
GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process 4.69% (3/64) 3.62 0.001908 0.047105
GO:0005847 mRNA cleavage and polyadenylation specificity factor complex 3.12% (2/64) 4.93 0.001977 0.048056
GO:0009896 positive regulation of catabolic process 7.81% (5/64) 2.48 0.002037 0.04874
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_51 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_59 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_69 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_94 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_103 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_114 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_137 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_142 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_155 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_167 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_190 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_203 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_236 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_269 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_8 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_19 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_21 0.01 Orthogroups with 8 Potato genotypes Compare
Sequences (64) (download table)

InterPro Domains

GO Terms

Family Terms