SOLTUB.AGRIA.G00000002800

Description : Crossover junction endonuclease MUS81-like protein

Gene families : OG_02_0005357 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002800
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_282

Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	None	Extended
BP	GO:0000077	DNA damage checkpoint signaling	None	Extended
CC	GO:0000228	nuclear chromosome	None	Extended
BP	GO:0000712	resolution of meiotic recombination intermediates	IEA	AHRD
BP	GO:0000723	telomere maintenance	IEA	AHRD
BP	GO:0000724	double-strand break repair via homologous recombination	None	Extended
BP	GO:0000725	recombinational repair	None	Extended
BP	GO:0000727	double-strand break repair via break-induced replication	IEA	AHRD
CC	GO:0000793	condensed chromosome	None	Extended
CC	GO:0000794	condensed nuclear chromosome	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004520	endodeoxyribonuclease activity	None	Extended
MF	GO:0004536	deoxyribonuclease activity	None	Extended
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005694	chromosome	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006312	mitotic recombination	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007093	mitotic cell cycle checkpoint signaling	None	Extended
BP	GO:0007129	homologous chromosome pairing at meiosis	IEA	AHRD
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007346	regulation of mitotic cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010948	negative regulation of cell cycle process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016889	endodeoxyribonuclease activity, producing 3'-phosphomonoesters	None	Extended
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031570	DNA integrity checkpoint signaling	None	Extended
BP	GO:0031573	mitotic intra-S DNA damage checkpoint signaling	IEA	AHRD
BP	GO:0032200	telomere organization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042770	signal transduction in response to DNA damage	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044773	mitotic DNA damage checkpoint signaling	None	Extended
BP	GO:0044774	mitotic DNA integrity checkpoint signaling	None	Extended
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045930	negative regulation of mitotic cell cycle	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048256	flap endonuclease activity	None	Extended
MF	GO:0048257	3'-flap endonuclease activity	IEA	AHRD
CC	GO:0048476	Holliday junction resolvase complex	IEA	AHRD
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0061982	meiosis I cell cycle process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901987	regulation of cell cycle phase transition	None	Extended
BP	GO:1901988	negative regulation of cell cycle phase transition	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
CC	GO:1905347	endodeoxyribonuclease complex	None	Extended
CC	GO:1905348	endonuclease complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000781	chromosome, telomeric region	IEP	Predict GO terms from Neighborhoods
CC	GO:0000785	chromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0000792	heterochromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0000808	origin recognition complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000939	inner kinetochore	IEP	Predict GO terms from Neighborhoods
MF	GO:0003682	chromatin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003688	DNA replication origin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005664	nuclear origin of replication recognition complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005813	centrosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005815	microtubule organizing center	IEP	Predict GO terms from Neighborhoods
BP	GO:0006270	DNA replication initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030261	chromosome condensation	IEP	Predict GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011335	Restrct_endonuc-II-like	416	561
IPR006166	ERCC4_domain	423	552

External Links

No external refs found!

SOLTUB.AGRIA.G00000002800

Expression Profile

Co-expression Networks

Functional Annotation