SOLTUB.AGRIA.G00000027040


Description : Cyclin-dependent kinase


Gene families : OG_02_0004826 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027040
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_13


Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA AHRD
BP GO:0001558 regulation of cell growth IEA AHRD
BP GO:0001824 blastocyst development IEA AHRD
BP GO:0002225 positive regulation of antimicrobial peptide production IEA AHRD
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEA AHRD
MF GO:0005516 calmodulin binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006355 regulation of DNA-templated transcription IEA AHRD
BP GO:0006907 pinocytosis IEA AHRD
BP GO:0006909 phagocytosis IEA AHRD
BP GO:0007088 regulation of mitotic nuclear division IEA AHRD
BP GO:0007089 traversing start control point of mitotic cell cycle IEA AHRD
BP GO:0007276 gamete generation IEA AHRD
BP GO:0008285 negative regulation of cell population proliferation IEA AHRD
MF GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IEA AHRD
BP GO:0010584 pollen exine formation IEA AHRD
CC GO:0012505 endomembrane system IEA AHRD
CC GO:0016020 membrane IEA AHRD
BP GO:0018107 peptidyl-threonine phosphorylation IEA AHRD
BP GO:0019954 asexual reproduction IEA AHRD
BP GO:0030435 sporulation resulting in formation of a cellular spore IEA AHRD
BP GO:0031157 regulation of aggregate size involved in sorocarp development IEA AHRD
BP GO:0032953 regulation of (1->3)-beta-D-glucan biosynthetic process IEA AHRD
BP GO:0032956 regulation of actin cytoskeleton organization IEA AHRD
CC GO:0036064 ciliary basal body IEA AHRD
BP GO:0040019 positive regulation of embryonic development IEA AHRD
BP GO:0043410 positive regulation of MAPK cascade IEA AHRD
BP GO:0045752 positive regulation of Toll signaling pathway IEA AHRD
BP GO:0050684 regulation of mRNA processing IEA AHRD
CC GO:0072686 mitotic spindle IEA AHRD
MF GO:0106310 protein serine kinase activity IEA AHRD
BP GO:1902018 negative regulation of cilium assembly IEA AHRD
BP GO:2001234 negative regulation of apoptotic signaling pathway IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000245 spliceosomal complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000280 nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0002230 positive regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
MF GO:0004708 MAP kinase kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007127 meiosis I IEP Predict GO terms from Neighborhoods
BP GO:0007131 reciprocal meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:0010042 response to manganese ion IEP Predict GO terms from Neighborhoods
BP GO:0010045 response to nickel cation IEP Predict GO terms from Neighborhoods
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0010369 chromocenter IEP Predict GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0019005 SCF ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0019236 response to pheromone IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031137 regulation of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
BP GO:0031139 positive regulation of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0031935 obsolete regulation of chromatin silencing IEP Predict GO terms from Neighborhoods
BP GO:0032206 positive regulation of telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Predict GO terms from Neighborhoods
BP GO:0035825 homologous recombination IEP Predict GO terms from Neighborhoods
MF GO:0043047 single-stranded telomeric DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044030 regulation of DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Predict GO terms from Neighborhoods
BP GO:0050691 regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
CC GO:0071004 U2-type prespliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071010 prespliceosome IEP Predict GO terms from Neighborhoods
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP Predict GO terms from Neighborhoods
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0140013 meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0140527 reciprocal homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:1901672 positive regulation of systemic acquired resistance IEP Predict GO terms from Neighborhoods
BP GO:1902288 regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902290 positive regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902457 negative regulation of stomatal opening IEP Predict GO terms from Neighborhoods
MF GO:1905761 SCF ubiquitin ligase complex binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 11 312
IPR011009 Kinase-like_dom_sf 3 314
No external refs found!