SOLTUB.AGRIA.G00000027107

Description : beta-carotene isomerase D27

Gene families : OG_02_0017881 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000027107
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_50

Type	GO Term	Name	Evidence	Source
BP	GO:0001763	morphogenesis of a branching structure	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010223	secondary shoot formation	IEA	AHRD
BP	GO:0010346	shoot axis formation	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	IEA	AHRD
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901334	lactone metabolic process	None	Extended
BP	GO:1901336	lactone biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901600	strigolactone metabolic process	None	Extended
BP	GO:1901601	strigolactone biosynthetic process	IEA	AHRD
BP	GO:1905393	plant organ formation	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0001523	retinoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001649	osteoblast differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0001917	photoreceptor inner segment	IEP	Predict GO terms from Neighborhoods
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004035	alkaline phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004725	protein tyrosine phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004745	NAD-retinol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005902	microvillus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006071	glycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006110	regulation of glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006111	regulation of gluconeogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006114	glycerol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006662	glycerol ether metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007601	visual perception	IEP	Predict GO terms from Neighborhoods
MF	GO:0008106	alcohol dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008967	phosphoglycolate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009111	vitamin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009399	nitrogen fixation	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009853	photorespiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010028	xanthophyll cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0010190	cytochrome b6f complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010507	negative regulation of autophagy	IEP	Predict GO terms from Neighborhoods
CC	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)	IEP	Predict GO terms from Neighborhoods
BP	GO:0010677	negative regulation of cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016062	adaptation of rhodopsin mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0016122	xanthophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0016311	dephosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predict GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0019400	alditol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019401	alditol biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019838	growth factor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0023058	adaptation of signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0030027	lamellipodium	IEP	Predict GO terms from Neighborhoods
BP	GO:0030091	protein repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0030834	regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030836	positive regulation of actin filament depolymerization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031111	negative regulation of microtubule polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0031247	actin rod assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031256	leading edge membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031978	plastid thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0032154	cleavage furrow	IEP	Predict GO terms from Neighborhoods
BP	GO:0032361	pyridoxal phosphate catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032587	ruffle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032790	ribosome disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033614	chloroplast proton-transporting ATP synthase complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0033721	aldehyde dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0033883	pyridoxal phosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0035335	peptidyl-tyrosine dephosphorylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042365	water-soluble vitamin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042572	retinol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042574	retinal metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042816	vitamin B6 metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042820	vitamin B6 catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043023	ribosomal large subunit binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043136	glycerol-3-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043461	proton-transporting ATP synthase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043470	regulation of carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045721	negative regulation of gluconeogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045821	positive regulation of glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045913	positive regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045981	positive regulation of nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046173	polyol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046185	aldehyde catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047538	2-carboxy-D-arabinitol-1-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048564	photosystem I assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0050953	sensory perception of light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051017	actin filament bundle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051604	protein maturation	IEP	Predict GO terms from Neighborhoods
MF	GO:0052650	NADP-retinol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0060090	molecular adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061572	actin filament bundle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0070372	regulation of ERK1 and ERK2 cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070374	positive regulation of ERK1 and ERK2 cascade	IEP	Predict GO terms from Neighborhoods
CC	GO:0070938	contractile ring	IEP	Predict GO terms from Neighborhoods
BP	GO:0071318	cellular response to ATP	IEP	Predict GO terms from Neighborhoods
BP	GO:0071559	response to transforming growth factor beta	IEP	Predict GO terms from Neighborhoods
BP	GO:0071560	cellular response to transforming growth factor beta stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072344	rescue of stalled ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0097191	extrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0097216	guanosine tetraphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0097428	protein maturation by iron-sulfur cluster transfer	IEP	Predict GO terms from Neighborhoods
MF	GO:0097573	glutathione oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0098519	obsolete nucleotide phosphatase activity, acting on free nucleotides	IEP	Predict GO terms from Neighborhoods
CC	GO:0098858	actin-based cell projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0110095	cellular detoxification of aldehyde	IEP	Predict GO terms from Neighborhoods
BP	GO:1900544	positive regulation of purine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901530	response to hypochlorite	IEP	Predict GO terms from Neighborhoods
BP	GO:1901881	positive regulation of protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:1903578	regulation of ATP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903580	positive regulation of ATP metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR025114	D27-like_C	165	247

External Links

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SOLTUB.AGRIA.G00000027107

Expression Profile

Co-expression Networks

Functional Annotation