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  5. SOLTUB.AGRIA.G00000002833

SOLTUB.AGRIA.G00000002833


Description : RmlC-like cupins superfamily protein


Gene families : OG_02_0000074 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000002833
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_30

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000002836 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000002835 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000002836 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000002835 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000002836 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEA AHRD
CC GO:0031012 extracellular matrix IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0000118 histone deacetylase complex IEP Predict GO terms from Neighborhoods
CC GO:0000776 kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0001676 long-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001678 cellular glucose homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0002230 positive regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0002244 hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Predict GO terms from Neighborhoods
MF GO:0004795 threonine synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005775 vacuolar lumen IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006476 protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0006505 GPI anchor metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006507 GPI anchor release IEP Predict GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006566 threonine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007411 axon guidance IEP Predict GO terms from Neighborhoods
BP GO:0008045 motor neuron axon guidance IEP Predict GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0008793 aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009070 serine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009088 threonine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009683 indoleacetic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009684 indoleacetic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009830 cell wall modification involved in abscission IEP Predict GO terms from Neighborhoods
BP GO:0009851 auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
MF GO:0010326 methionine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016575 histone deacetylation IEP Predict GO terms from Neighborhoods
CC GO:0016580 Sin3 complex IEP Predict GO terms from Neighborhoods
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predict GO terms from Neighborhoods
MF GO:0016752 sinapoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016753 O-sinapoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016754 sinapoylglucose-malate O-sinapoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
CC GO:0017053 transcription repressor complex IEP Predict GO terms from Neighborhoods
CC GO:0018995 host cellular component IEP Predict GO terms from Neighborhoods
BP GO:0019344 cysteine biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
BP GO:0021532 neural tube patterning IEP Predict GO terms from Neighborhoods
BP GO:0021895 cerebral cortex neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0021953 central nervous system neuron differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0030516 regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0031937 obsolete positive regulation of chromatin silencing IEP Predict GO terms from Neighborhoods
BP GO:0033559 unsaturated fatty acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0033643 host cell part IEP Predict GO terms from Neighborhoods
CC GO:0033644 host cell membrane IEP Predict GO terms from Neighborhoods
BP GO:0035065 regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035601 protein deacylation IEP Predict GO terms from Neighborhoods
BP GO:0036109 alpha-linolenic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042754 negative regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
BP GO:0043392 negative regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044277 cell wall disassembly IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
MF GO:0045485 omega-6 fatty acid desaturase activity IEP Predict GO terms from Neighborhoods
BP GO:0045666 positive regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047312 L-phenylalanine:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047635 alanine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
CC GO:0048225 suberin network IEP Predict GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
MF GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050183 phosphatidylcholine 12-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050688 regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050691 regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0051595 response to methylglyoxal IEP Predict GO terms from Neighborhoods
MF GO:0052793 pectin acetylesterase activity IEP Predict GO terms from Neighborhoods
BP GO:0055078 sodium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Predict GO terms from Neighborhoods
MF GO:0070529 L-tryptophan aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070546 L-phenylalanine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070547 L-tyrosine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070548 L-glutamine aminotransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0070822 Sin3-type complex IEP Predict GO terms from Neighborhoods
BP GO:0071322 cellular response to carbohydrate stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071326 cellular response to monosaccharide stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071331 cellular response to hexose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071333 cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080098 L-tyrosine:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080099 L-methionine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080100 L-glutamine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0085042 periarbuscular membrane IEP Predict GO terms from Neighborhoods
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0097485 neuron projection guidance IEP Predict GO terms from Neighborhoods
BP GO:0098732 macromolecule deacylation IEP Predict GO terms from Neighborhoods
MF GO:0102518 (11Z)-eicosenoate 14-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102985 delta12-fatty-acid desaturase activity IEP Predict GO terms from Neighborhoods
MF GO:0102987 palmitoleic acid delta 12 desaturase activity IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140416 transcription regulator inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:1900181 negative regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901674 regulation of histone H3-K27 acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901675 negative regulation of histone H3-K27 acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000677 regulation of transcription regulatory region DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000678 negative regulation of transcription regulatory region DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006045 Cupin_1 73 216
IPR011051 RmlC_Cupin_sf 25 223
No external refs found!