SOLTUB.AGRIA.G00000028139

Description : DNA topoisomerase 2-binding protein 1

Gene families : OG_02_0016118 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028139
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_245

Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	None	Extended
BP	GO:0000076	DNA replication checkpoint signaling	IEA	AHRD
CC	GO:0000228	nuclear chromosome	None	Extended
CC	GO:0000785	chromatin	IEA	AHRD
CC	GO:0000793	condensed chromosome	None	Extended
CC	GO:0000794	condensed nuclear chromosome	IEA	AHRD
CC	GO:0001673	male germ cell nucleus	IEA	AHRD
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001934	positive regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	None	Extended
CC	GO:0005694	chromosome	None	Extended
CC	GO:0005856	cytoskeleton	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	IEA	AHRD
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010212	response to ionizing radiation	IEA	AHRD
BP	GO:0010562	positive regulation of phosphorus metabolic process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010948	negative regulation of cell cycle process	None	Extended
CC	GO:0015629	actin cytoskeleton	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016604	nuclear body	None	Extended
CC	GO:0016605	PML body	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	IEA	AHRD
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030174	regulation of DNA-templated DNA replication initiation	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	None	Extended
BP	GO:0031570	DNA integrity checkpoint signaling	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033135	regulation of peptidyl-serine phosphorylation	None	Extended
BP	GO:0033138	positive regulation of peptidyl-serine phosphorylation	IEA	AHRD
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033674	positive regulation of kinase activity	None	Extended
BP	GO:0034502	protein localization to chromosome	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0035561	regulation of chromatin binding	None	Extended
BP	GO:0035563	positive regulation of chromatin binding	IEA	AHRD
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042327	positive regulation of phosphorylation	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
CC	GO:0043073	germ cell nucleus	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0045860	positive regulation of protein kinase activity	IEA	AHRD
BP	GO:0045937	positive regulation of phosphate metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051098	regulation of binding	None	Extended
BP	GO:0051099	positive regulation of binding	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051347	positive regulation of transferase activity	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071163	DNA replication preinitiation complex assembly	None	Extended
BP	GO:0071165	GINS complex assembly	IEA	AHRD
BP	GO:0071168	protein localization to chromatin	IEA	AHRD
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090329	regulation of DNA-templated DNA replication	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901987	regulation of cell cycle phase transition	None	Extended
BP	GO:1901988	negative regulation of cell cycle phase transition	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000132	establishment of mitotic spindle orientation	IEP	Predict GO terms from Neighborhoods
BP	GO:0000278	mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
MF	GO:0001046	core promoter sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001505	regulation of neurotransmitter levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0002791	regulation of peptide secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0002793	positive regulation of peptide secretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005657	replication fork	IEP	Predict GO terms from Neighborhoods
CC	GO:0005705	polytene chromosome interband	IEP	Predict GO terms from Neighborhoods
CC	GO:0005739	mitochondrion	IEP	Predict GO terms from Neighborhoods
CC	GO:0005814	centriole	IEP	Predict GO terms from Neighborhoods
CC	GO:0005868	cytoplasmic dynein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005875	microtubule associated complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005930	axoneme	IEP	Predict GO terms from Neighborhoods
BP	GO:0007290	spermatid nucleus elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007291	sperm individualization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007292	female gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007349	cellularization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007476	imaginal disc-derived wing morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0008407	chaeta morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0009378	four-way junction helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010623	programmed cell death involved in cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010709	heteroduplex formation involved in double-strand break repair via synthesis-dependent strand annealing	IEP	Predict GO terms from Neighborhoods
BP	GO:0010970	transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0014041	regulation of neuron maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0014042	positive regulation of neuron maturation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0016459	myosin complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0016461	unconventional myosin complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0030235	nitric-oxide synthase regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030286	dynein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0030491	heteroduplex formation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030667	secretory granule membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031475	myosin V complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032024	positive regulation of insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0032392	DNA geometric change	IEP	Predict GO terms from Neighborhoods
CC	GO:0032838	plasma membrane bounded cell projection cytoplasm	IEP	Predict GO terms from Neighborhoods
BP	GO:0034453	microtubule anchoring	IEP	Predict GO terms from Neighborhoods
BP	GO:0034454	microtubule anchoring at centrosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0035071	salivary gland cell autophagic cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0035107	appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035114	imaginal disc-derived appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035120	post-embryonic appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035721	intraciliary retrograde transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035774	positive regulation of insulin secretion involved in cellular response to glucose stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0036292	DNA rewinding	IEP	Predict GO terms from Neighborhoods
MF	GO:0036310	ATP-dependent DNA/DNA annealing activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040001	establishment of mitotic spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0042073	intraciliary transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042126	nitrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042128	nitrate assimilation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042133	neurotransmitter metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0043596	nuclear replication fork	IEP	Predict GO terms from Neighborhoods
BP	GO:0044458	motile cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0044782	cilium organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045005	DNA-templated DNA replication maintenance of fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045019	negative regulation of nitric oxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045176	apical protein localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0045177	apical part of cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0045428	regulation of nitric oxide biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0045505	dynein intermediate chain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045664	regulation of neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045724	positive regulation of cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0046883	regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046887	positive regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048102	autophagic cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0048477	oogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050708	regulation of protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0050714	positive regulation of protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0050796	regulation of insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051017	actin filament bundle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0051047	positive regulation of secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051293	establishment of spindle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051294	establishment of spindle orientation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051653	spindle localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051959	dynein light intermediate chain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0060271	cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0060491	regulation of cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0061178	regulation of insulin secretion involved in cellular response to glucose stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0061572	actin filament bundle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071941	nitrogen cycle metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072393	microtubule anchoring at microtubule organizing center	IEP	Predict GO terms from Neighborhoods
CC	GO:0072686	mitotic spindle	IEP	Predict GO terms from Neighborhoods
BP	GO:0080164	regulation of nitric oxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090087	regulation of peptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090276	regulation of peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090277	positive regulation of peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0097110	scaffold protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0097542	ciliary tip	IEP	Predict GO terms from Neighborhoods
MF	GO:0097718	disordered domain specific binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0099111	microtubule-based transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0099568	cytoplasmic region	IEP	Predict GO terms from Neighborhoods
CC	GO:0101003	ficolin-1-rich granule membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0120031	plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120032	regulation of plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120034	positive regulation of plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0120111	neuron projection cytoplasm	IEP	Predict GO terms from Neighborhoods
MF	GO:0140666	annealing activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902017	regulation of cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902117	positive regulation of organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902855	regulation of non-motile cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902857	positive regulation of non-motile cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1903429	regulation of cell maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903431	positive regulation of cell maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903532	positive regulation of secretion by cell	IEP	Predict GO terms from Neighborhoods
CC	GO:1904115	axon cytoplasm	IEP	Predict GO terms from Neighborhoods
BP	GO:1904406	negative regulation of nitric oxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904799	regulation of neuron remodeling	IEP	Predict GO terms from Neighborhoods
BP	GO:1904801	positive regulation of neuron remodeling	IEP	Predict GO terms from Neighborhoods
MF	GO:1990814	DNA/DNA annealing activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000603	regulation of secondary growth	IEP	Predict GO terms from Neighborhoods
BP	GO:2000605	positive regulation of secondary growth	IEP	Predict GO terms from Neighborhoods
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036420	BRCT_dom_sf	58	147
IPR036420	BRCT_dom_sf	196	273
IPR001357	BRCT_dom	63	129

External Links

No external refs found!

SOLTUB.AGRIA.G00000028139

Expression Profile

Co-expression Networks

Functional Annotation