Description : Transposon-like protein
Gene families : OG_02_0000246 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028190 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000014498 | No alias | PttA2 protein, putative | 0.04 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000014498 | No alias | PttA2 protein, putative | 0.04 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000014498 | No alias | PttA2 protein, putative | 0.04 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000028 | ribosomal small subunit assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000427 | plastid-encoded plastid RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000957 | mitochondrial RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000958 | mitochondrial mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000965 | mitochondrial RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004532 | exoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004654 | polyribonucleotide nucleotidyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006544 | glycine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006563 | L-serine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009842 | cyanelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010322 | regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010323 | negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010677 | negative regulation of cellular carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042644 | chloroplast nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042646 | plastid nucleoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045827 | negative regulation of isoprenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045912 | negative regulation of carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047213 | anthocyanidin 3-O-glucosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051055 | negative regulation of lipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071071 | regulation of phospholipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071072 | negative regulation of phospholipid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090503 | RNA phosphodiester bond hydrolysis, exonucleolytic | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0101031 | chaperone complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903725 | regulation of phospholipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903726 | negative regulation of phospholipid metabolic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |