SOLTUB.AGRIA.G00000028319

Description : Tocopherol cyclase

Gene families : OG_02_0023049 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028319
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_225

Type	GO Term	Name	Evidence	Source
BP	GO:0003008	system process	None	Extended
BP	GO:0003013	circulatory system process	None	Extended
BP	GO:0003018	vascular process in circulatory system	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	IEA	AHRD
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006775	fat-soluble vitamin metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008643	carbohydrate transport	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009528	plastid inner membrane	None	Extended
CC	GO:0009534	chloroplast thylakoid	IEA	AHRD
CC	GO:0009579	thylakoid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	IEA	AHRD
BP	GO:0009651	response to salt stress	IEA	AHRD
CC	GO:0009706	chloroplast inner membrane	IEA	AHRD
BP	GO:0009915	phloem sucrose loading	IEA	AHRD
MF	GO:0009975	cyclase activity	None	Extended
MF	GO:0009976	tocopherol cyclase activity	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010189	vitamin E biosynthetic process	IEA	AHRD
BP	GO:0010232	vascular transport	None	Extended
BP	GO:0010233	phloem transport	None	Extended
CC	GO:0010287	plastoglobule	IEA	AHRD
BP	GO:0015766	disaccharide transport	None	Extended
BP	GO:0015770	sucrose transport	None	Extended
BP	GO:0015772	oligosaccharide transport	None	Extended
BP	GO:0015994	chlorophyll metabolic process	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016122	xanthophyll metabolic process	IEA	AHRD
MF	GO:0016853	isomerase activity	IEA	AHRD
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031347	regulation of defense response	IEA	AHRD
CC	GO:0031969	chloroplast membrane	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042360	vitamin E metabolic process	None	Extended
BP	GO:0042362	fat-soluble vitamin biosynthetic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0052604	delta-tocopherol cyclase activity	IEA	AHRD
MF	GO:0052605	gamma-tocopherol cyclase activity	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0110126	phloem loading	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001523	retinoid metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0001917	photoreceptor inner segment	IEP	Predict GO terms from Neighborhoods
MF	GO:0004017	adenylate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004127	cytidylate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004550	nucleoside diphosphate kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005839	proteasome core complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006071	glycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006534	cysteine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007601	visual perception	IEP	Predict GO terms from Neighborhoods
MF	GO:0008106	alcohol dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0009000	selenocysteine lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009531	secondary cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009635	response to herbicide	IEP	Predict GO terms from Neighborhoods
BP	GO:0009636	response to toxic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009914	hormone transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010148	transpiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010158	abaxial cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010184	cytokinin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010208	pollen wall assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010222	stem vascular tissue pattern formation	IEP	Predict GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010373	negative regulation of gibberellin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010496	intercellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010584	pollen exine formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015692	lead ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015718	monocarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015850	organic hydroxy compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016062	adaptation of rhodopsin mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0016101	diterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016783	sulfurtransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predict GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predict GO terms from Neighborhoods
BP	GO:0018282	metal incorporation into metallo-sulfur cluster	IEP	Predict GO terms from Neighborhoods
BP	GO:0018283	iron incorporation into metallo-sulfur cluster	IEP	Predict GO terms from Neighborhoods
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019400	alditol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019432	triglyceride biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019632	shikimate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019637	organophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0019774	proteasome core complex, beta-subunit complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0023058	adaptation of signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030638	polyketide metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031071	cysteine desulfurase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033383	geranyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033721	aldehyde dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034002	(R)-limonene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034389	lipid droplet organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0034768	(E)-beta-ocimene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035002	liquid clearance, open tracheal system	IEP	Predict GO terms from Neighborhoods
BP	GO:0035148	tube formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035149	lumen formation, open tracheal system	IEP	Predict GO terms from Neighborhoods
BP	GO:0035152	regulation of tube architecture, open tracheal system	IEP	Predict GO terms from Neighborhoods
BP	GO:0035336	long-chain fatty-acyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035864	response to potassium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0035865	cellular response to potassium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0042044	fluid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042045	epithelial fluid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042572	retinol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042574	retinal metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042908	xenobiotic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043692	monoterpene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043693	monoterpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044571	[2Fe-2S] cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045054	constitutive secretory pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0045339	farnesyl diphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045827	negative regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046027	phospholipid:diacylglycerol acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046339	diacylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046864	isoprenoid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046865	terpenoid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048262	determination of dorsal/ventral asymmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0048580	regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048826	cotyledon morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048832	specification of plant organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048833	specification of floral organ number	IEP	Predict GO terms from Neighborhoods
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050550	pinene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050551	myrcene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050552	(4S)-limonene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050953	sensory perception of light stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0052650	NADP-retinol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	Predict GO terms from Neighborhoods
MF	GO:0070003	threonine-type peptidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0070505	pollen coat	IEP	Predict GO terms from Neighborhoods
BP	GO:0070633	transepithelial transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0080015	sabinene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080027	response to herbivore	IEP	Predict GO terms from Neighborhoods
BP	GO:0080110	sporopollenin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080168	abscisic acid transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0090482	vitamin transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097009	energy homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0097038	perinuclear endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0098754	detoxification	IEP	Predict GO terms from Neighborhoods
MF	GO:0102701	tricyclene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102703	camphene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0110095	cellular detoxification of aldehyde	IEP	Predict GO terms from Neighborhoods
BP	GO:0120194	regulation of anther dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0120195	positive regulation of anther dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0120254	olefinic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0140042	lipid droplet formation	IEP	Predict GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0150104	transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901656	glycoside transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1901938	(-)-exo-alpha-bergamotene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901940	(-)-exo-alpha-bergamotene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901941	(+)-epi-alpha-bisabolol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901943	(+)-epi-alpha-bisabolol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902183	regulation of shoot apical meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903173	fatty alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903175	fatty alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1905428	regulation of plant organ formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000032	regulation of secondary shoot formation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000306	positive regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR025893	Tocopherol_cyclase	102	458

External Links

No external refs found!

SOLTUB.AGRIA.G00000028319

Expression Profile

Co-expression Networks

Functional Annotation