SOLTUB.AGRIA.G00000028735

Description : Protein SENSITIVE TO UV 2

Gene families : OG_02_0020588 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Description : Cytochrome c biogenesis C

Gene families : OG_02_0003809 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type

Description

Actions

Neighborhood

HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044156

Cluster

HCCA Clusters (HRR 50 & PCC 0.5): Cluster_14Download
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Co-expression Networks

Type Description Actions

Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028735

Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_100

Functional Annotation

GO

Predicted GO

InterPro

Type GO Term Name Evidence Source

MF GO:0003674 molecular_function None Extended

MF GO:0005488 binding None Extended

MF GO:0005515 protein binding None Extended

CC GO:0005575 cellular_component None Extended

CC GO:0005634 nucleus IEA AHRD

CC GO:0005737 cytoplasm IEA AHRD

BP GO:0006950 response to stress None Extended

BP GO:0006974 cellular response to DNA damage stimulus IEA AHRD

BP GO:0008150 biological_process None Extended

BP GO:0009314 response to radiation None Extended

BP GO:0009411 response to UV None Extended

BP GO:0009416 response to light stimulus None Extended

BP GO:0009628 response to abiotic stimulus None Extended

BP GO:0009987 cellular process None Extended

BP GO:0010033 response to organic substance None Extended

BP GO:0010035 response to inorganic substance None Extended

BP GO:0010038 response to metal ion None Extended

BP GO:0010044 response to aluminum ion IEA AHRD

BP GO:0010212 response to ionizing radiation None Extended

BP GO:0010224 response to UV-B IEA AHRD

BP GO:0010332 response to gamma radiation IEA AHRD

BP GO:0010564 regulation of cell cycle process None Extended

BP GO:0033554 cellular response to stress None Extended

BP GO:0042221 response to chemical None Extended

CC GO:0043226 organelle None Extended

CC GO:0043227 membrane-bounded organelle None Extended

CC GO:0043229 intracellular organelle None Extended

CC GO:0043231 intracellular membrane-bounded organelle None Extended

BP GO:0045787 positive regulation of cell cycle None Extended

MF GO:0046983 protein dimerization activity IEA AHRD

BP GO:0048518 positive regulation of biological process None Extended

BP GO:0048522 positive regulation of cellular process None Extended

BP GO:0050789 regulation of biological process None Extended

BP GO:0050794 regulation of cellular process None Extended

BP GO:0050896 response to stimulus None Extended

BP GO:0051716 cellular response to stimulus None Extended

BP GO:0051726 regulation of cell cycle None Extended

BP GO:0065007 biological regulation None Extended

BP GO:0072710 response to hydroxyurea IEA AHRD

BP GO:0072718 response to cisplatin IEA AHRD

BP GO:0090068 positive regulation of cell cycle process None Extended

CC GO:0110165 cellular anatomical entity None Extended

BP GO:1901698 response to nitrogen compound None Extended

BP GO:1901987 regulation of cell cycle phase transition None Extended

BP GO:1901989 positive regulation of cell cycle phase transition None Extended

BP GO:1902749 regulation of cell cycle G2/M phase transition None Extended

BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEA AHRD

Toggle parental

Type GO Term Name Evidence Source

CC GO:0000118 histone deacetylase complex IEP Predict GO terms from Neighborhoods

BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods

CC GO:0000151 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods

MF GO:0000217 DNA secondary structure binding IEP Predict GO terms from Neighborhoods

BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predict GO terms from Neighborhoods

BP GO:0002244 hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods

MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods

MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods

MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods

MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods

MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods

MF GO:0005345 purine nucleobase transmembrane transporter activity IEP Predict GO terms from Neighborhoods

MF GO:0005350 pyrimidine nucleobase transmembrane transporter activity IEP Predict GO terms from Neighborhoods

MF GO:0005527 macrolide binding IEP Predict GO terms from Neighborhoods

MF GO:0005528 FK506 binding IEP Predict GO terms from Neighborhoods

CC GO:0005677 chromatin silencing complex IEP Predict GO terms from Neighborhoods

CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods

CC GO:0005700 polytene chromosome IEP Predict GO terms from Neighborhoods

CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods

BP GO:0006277 DNA amplification IEP Predict GO terms from Neighborhoods

BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods

BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods

BP GO:0006334 nucleosome assembly IEP Predict GO terms from Neighborhoods

BP GO:0006335 DNA replication-dependent chromatin assembly IEP Predict GO terms from Neighborhoods

BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods

BP GO:0006349 regulation of gene expression by genomic imprinting IEP Predict GO terms from Neighborhoods

BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods

BP GO:0006473 protein acetylation IEP Predict GO terms from Neighborhoods

BP GO:0006475 internal protein amino acid acetylation IEP Predict GO terms from Neighborhoods

BP GO:0006479 protein methylation IEP Predict GO terms from Neighborhoods

BP GO:0006814 sodium ion transport IEP Predict GO terms from Neighborhoods

BP GO:0006820 anion transport IEP Predict GO terms from Neighborhoods

BP GO:0006863 purine nucleobase transport IEP Predict GO terms from Neighborhoods

BP GO:0007307 eggshell chorion gene amplification IEP Predict GO terms from Neighborhoods

BP GO:0007379 segment specification IEP Predict GO terms from Neighborhoods

BP GO:0008213 protein alkylation IEP Predict GO terms from Neighborhoods

BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods

BP GO:0009890 negative regulation of biosynthetic process IEP Predict GO terms from Neighborhoods

BP GO:0009892 negative regulation of metabolic process IEP Predict GO terms from Neighborhoods

CC GO:0009925 basal plasma membrane IEP Predict GO terms from Neighborhoods

BP GO:0010026 trichome differentiation IEP Predict GO terms from Neighborhoods

BP GO:0010050 vegetative phase change IEP Predict GO terms from Neighborhoods

BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods

BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods

BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods

BP GO:0010582 floral meristem determinacy IEP Predict GO terms from Neighborhoods

BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods

BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods

MF GO:0015081 sodium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods

MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods

MF GO:0015145 monosaccharide transmembrane transporter activity IEP Predict GO terms from Neighborhoods

MF GO:0015205 nucleobase transmembrane transporter activity IEP Predict GO terms from Neighborhoods

MF GO:0015207 adenine transmembrane transporter activity IEP Predict GO terms from Neighborhoods

MF GO:0015208 guanine transmembrane transporter activity IEP Predict GO terms from Neighborhoods

MF GO:0015210 uracil transmembrane transporter activity IEP Predict GO terms from Neighborhoods

BP GO:0015706 nitrate transmembrane transport IEP Predict GO terms from Neighborhoods

BP GO:0015851 nucleobase transport IEP Predict GO terms from Neighborhoods

BP GO:0015853 adenine transport IEP Predict GO terms from Neighborhoods

BP GO:0015854 guanine transport IEP Predict GO terms from Neighborhoods

BP GO:0015855 pyrimidine nucleobase transport IEP Predict GO terms from Neighborhoods

BP GO:0015857 uracil transport IEP Predict GO terms from Neighborhoods

MF GO:0016018 cyclosporin A binding IEP Predict GO terms from Neighborhoods

BP GO:0016570 histone modification IEP Predict GO terms from Neighborhoods

BP GO:0016571 histone methylation IEP Predict GO terms from Neighborhoods

BP GO:0016573 histone acetylation IEP Predict GO terms from Neighborhoods

CC GO:0016581 NuRD complex IEP Predict GO terms from Neighborhoods

BP GO:0016584 obsolete nucleosome positioning IEP Predict GO terms from Neighborhoods

CC GO:0016589 NURF complex IEP Predict GO terms from Neighborhoods

MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods

MF GO:0016922 nuclear receptor binding IEP Predict GO terms from Neighborhoods

BP GO:0018022 peptidyl-lysine methylation IEP Predict GO terms from Neighborhoods

BP GO:0018023 peptidyl-lysine trimethylation IEP Predict GO terms from Neighborhoods

BP GO:0018193 peptidyl-amino acid modification IEP Predict GO terms from Neighborhoods

BP GO:0018205 peptidyl-lysine modification IEP Predict GO terms from Neighborhoods

BP GO:0018208 peptidyl-proline modification IEP Predict GO terms from Neighborhoods

BP GO:0018393 internal peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods

BP GO:0018394 peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods

BP GO:0019076 viral release from host cell IEP Predict GO terms from Neighborhoods

BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods

MF GO:0030331 nuclear estrogen receptor binding IEP Predict GO terms from Neighborhoods

MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods

BP GO:0030912 response to deep water IEP Predict GO terms from Neighborhoods

CC GO:0031010 ISWI-type complex IEP Predict GO terms from Neighborhoods

BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods

BP GO:0031101 fin regeneration IEP Predict GO terms from Neighborhoods

BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods

BP GO:0031445 regulation of heterochromatin formation IEP Predict GO terms from Neighborhoods

CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods

MF GO:0031490 chromatin DNA binding IEP Predict GO terms from Neighborhoods

MF GO:0031491 nucleosome binding IEP Predict GO terms from Neighborhoods

CC GO:0031519 PcG protein complex IEP Predict GO terms from Neighborhoods

CC GO:0031523 Myb complex IEP Predict GO terms from Neighborhoods

BP GO:0032259 methylation IEP Predict GO terms from Neighborhoods

BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods

CC GO:0033186 CAF-1 complex IEP Predict GO terms from Neighborhoods

BP GO:0034389 lipid droplet organization IEP Predict GO terms from Neighborhoods

CC GO:0034708 methyltransferase complex IEP Predict GO terms from Neighborhoods

BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods

BP GO:0034968 histone lysine methylation IEP Predict GO terms from Neighborhoods

BP GO:0035065 regulation of histone acetylation IEP Predict GO terms from Neighborhoods

BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods

CC GO:0035097 histone methyltransferase complex IEP Predict GO terms from Neighborhoods

CC GO:0035098 ESC/E(Z) complex IEP Predict GO terms from Neighborhoods

BP GO:0035344 hypoxanthine transport IEP Predict GO terms from Neighborhoods

BP GO:0035891 exit from host cell IEP Predict GO terms from Neighborhoods

BP GO:0042026 protein refolding IEP Predict GO terms from Neighborhoods

BP GO:0042127 regulation of cell population proliferation IEP Predict GO terms from Neighborhoods

BP GO:0042246 tissue regeneration IEP Predict GO terms from Neighborhoods

BP GO:0042766 obsolete nucleosome mobilization IEP Predict GO terms from Neighborhoods

MF GO:0042826 histone deacetylase binding IEP Predict GO terms from Neighborhoods

MF GO:0043022 ribosome binding IEP Predict GO terms from Neighborhoods

CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods

CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods

BP GO:0043414 macromolecule methylation IEP Predict GO terms from Neighborhoods

BP GO:0043543 protein acylation IEP Predict GO terms from Neighborhoods

BP GO:0043966 histone H3 acetylation IEP Predict GO terms from Neighborhoods

BP GO:0044000 movement in host IEP Predict GO terms from Neighborhoods

BP GO:0045069 regulation of viral genome replication IEP Predict GO terms from Neighborhoods

BP GO:0045070 positive regulation of viral genome replication IEP Predict GO terms from Neighborhoods

BP GO:0045892 negative regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods

BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods

BP GO:0046689 response to mercury ion IEP Predict GO terms from Neighborhoods

BP GO:0048366 leaf development IEP Predict GO terms from Neighborhoods

BP GO:0048523 negative regulation of cellular process IEP Predict GO terms from Neighborhoods

BP GO:0048524 positive regulation of viral process IEP Predict GO terms from Neighborhoods

BP GO:0048827 phyllome development IEP Predict GO terms from Neighborhoods

BP GO:0050708 regulation of protein secretion IEP Predict GO terms from Neighborhoods

BP GO:0050714 positive regulation of protein secretion IEP Predict GO terms from Neighborhoods

BP GO:0050792 regulation of viral process IEP Predict GO terms from Neighborhoods

BP GO:0051047 positive regulation of secretion IEP Predict GO terms from Neighborhoods

MF GO:0051119 sugar transmembrane transporter activity IEP Predict GO terms from Neighborhoods

BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods

BP GO:0051180 vitamin transport IEP Predict GO terms from Neighborhoods

BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods

BP GO:0051568 histone H3-K4 methylation IEP Predict GO terms from Neighborhoods

BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods

BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods

BP GO:0051665 membrane raft localization IEP Predict GO terms from Neighborhoods

MF GO:0051879 Hsp90 protein binding IEP Predict GO terms from Neighborhoods

BP GO:0051881 regulation of mitochondrial membrane potential IEP Predict GO terms from Neighborhoods

BP GO:0061062 regulation of nematode larval development IEP Predict GO terms from Neighborhoods

BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods

BP GO:0070141 response to UV-A IEP Predict GO terms from Neighborhoods

BP GO:0070370 cellular heat acclimation IEP Predict GO terms from Neighborhoods

CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods

BP GO:0070734 histone H3-K27 methylation IEP Predict GO terms from Neighborhoods

CC GO:0070822 Sin3-type complex IEP Predict GO terms from Neighborhoods

BP GO:0071249 cellular response to nitrate IEP Predict GO terms from Neighborhoods

BP GO:0071492 cellular response to UV-A IEP Predict GO terms from Neighborhoods

BP GO:0071897 DNA biosynthetic process IEP Predict GO terms from Neighborhoods

BP GO:0072530 purine-containing compound transmembrane transport IEP Predict GO terms from Neighborhoods

BP GO:0072531 pyrimidine-containing compound transmembrane transport IEP Predict GO terms from Neighborhoods

CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods

BP GO:0080182 histone H3-K4 trimethylation IEP Predict GO terms from Neighborhoods

MF GO:0090482 vitamin transmembrane transporter activity IEP Predict GO terms from Neighborhoods

CC GO:0090545 CHD-type complex IEP Predict GO terms from Neighborhoods

MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods

BP GO:0098532 histone H3-K27 trimethylation IEP Predict GO terms from Neighborhoods

BP GO:0098702 adenine import across plasma membrane IEP Predict GO terms from Neighborhoods

BP GO:0098710 guanine import across plasma membrane IEP Predict GO terms from Neighborhoods

BP GO:0098721 uracil import across plasma membrane IEP Predict GO terms from Neighborhoods

BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods

BP GO:0120261 regulation of heterochromatin organization IEP Predict GO terms from Neighborhoods

BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods

BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods

MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods

BP GO:1901983 regulation of protein acetylation IEP Predict GO terms from Neighborhoods

BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods

BP GO:1902025 nitrate import IEP Predict GO terms from Neighborhoods

BP GO:1902170 cellular response to reactive nitrogen species IEP Predict GO terms from Neighborhoods

BP GO:1902275 regulation of chromatin organization IEP Predict GO terms from Neighborhoods

BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods

BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods

BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods

BP GO:1903532 positive regulation of secretion by cell IEP Predict GO terms from Neighborhoods

BP GO:1903716 guanine transmembrane transport IEP Predict GO terms from Neighborhoods

BP GO:1903791 uracil transmembrane transport IEP Predict GO terms from Neighborhoods

BP GO:1903900 regulation of viral life cycle IEP Predict GO terms from Neighborhoods

BP GO:1904082 pyrimidine nucleobase transmembrane transport IEP Predict GO terms from Neighborhoods

BP GO:1904823 purine nucleobase transmembrane transport IEP Predict GO terms from Neighborhoods

BP GO:2000653 regulation of genetic imprinting IEP Predict GO terms from Neighborhoods

BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods

BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods

BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

External Links

No external refs found!

StCoExpNet Features

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SOLTUB.AGRIA.G00000028735

Expression Profile

Expression Profile

Co-expression Networks

Co-expression Networks

Functional Annotation