SOLTUB.AGRIA.G00000028753

Description : Cellulose synthase

Gene families : OG_02_0000801 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028753
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_252

Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	None	Extended
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
BP	GO:0000919	cell plate assembly	IEA	AHRD
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IEA	AHRD
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005802	trans-Golgi network	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009832	plant-type cell wall biogenesis	None	Extended
BP	GO:0009833	plant-type primary cell wall biogenesis	IEA	AHRD
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEA	AHRD
BP	GO:0009846	pollen germination	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
CC	GO:0010330	cellulose synthase complex	IEA	AHRD
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
BP	GO:0010395	rhamnogalacturonan I metabolic process	None	Extended
BP	GO:0010400	rhamnogalacturonan I side chain metabolic process	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	AHRD
MF	GO:0019187	beta-1,4-mannosyltransferase activity	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030173	integral component of Golgi membrane	IEA	AHRD
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	AHRD
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031228	intrinsic component of Golgi membrane	None	Extended
CC	GO:0031300	intrinsic component of organelle membrane	None	Extended
CC	GO:0031301	integral component of organelle membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0048367	shoot system development	IEA	AHRD
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048767	root hair elongation	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
MF	GO:0051753	mannan synthase activity	IEA	AHRD
BP	GO:0052546	cell wall pectin metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0070085	glycosylation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097502	mannosylation	IEA	AHRD
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000022	mitotic spindle elongation	IEP	Predict GO terms from Neighborhoods
CC	GO:0000138	Golgi trans cisterna	IEP	Predict GO terms from Neighborhoods
CC	GO:0000164	protein phosphatase type 1 complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004806	triglyceride lipase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005797	Golgi medial cisterna	IEP	Predict GO terms from Neighborhoods
CC	GO:0005816	spindle pole body	IEP	Predict GO terms from Neighborhoods
CC	GO:0005912	adherens junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0005979	regulation of glycogen biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005981	regulation of glycogen catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006080	substituted mannan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006772	thiamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006915	apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007623	circadian rhythm	IEP	Predict GO terms from Neighborhoods
MF	GO:0008157	protein phosphatase 1 binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008219	cell death	IEP	Predict GO terms from Neighborhoods
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0008378	galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008970	phospholipase A1 activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009228	thiamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009649	entrainment of circadian clock	IEP	Predict GO terms from Neighborhoods
BP	GO:0009800	cinnamic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009969	xyloglucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010044	response to aluminum ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010161	red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010288	response to lead ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010392	galactoglucomannan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010411	xyloglucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010941	regulation of cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0012501	programmed cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016405	CoA-ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predict GO terms from Neighborhoods
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016878	acid-thiol ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018858	benzoate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018904	ether metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030010	establishment of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030324	lung development	IEP	Predict GO terms from Neighborhoods
CC	GO:0030428	cell septum	IEP	Predict GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031985	Golgi cisterna	IEP	Predict GO terms from Neighborhoods
BP	GO:0033494	ferulate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033843	xyloglucan 6-xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034309	primary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042131	thiamine phosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042285	xylosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0042587	glycogen granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043067	regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043153	entrainment of circadian clock by photoperiod	IEP	Predict GO terms from Neighborhoods
CC	GO:0043197	dendritic spine	IEP	Predict GO terms from Neighborhoods
CC	GO:0043204	perikaryon	IEP	Predict GO terms from Neighborhoods
BP	GO:0043470	regulation of carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043471	regulation of cellular carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044309	neuron spine	IEP	Predict GO terms from Neighborhoods
BP	GO:0044788	modulation by host of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044827	modulation by host of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0044830	modulation by host of viral RNA genome replication	IEP	Predict GO terms from Neighborhoods
MF	GO:0045296	cadherin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0046461	neutral lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046464	acylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046503	glycerolipid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047714	galactolipase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048754	branching morphogenesis of an epithelial tube	IEP	Predict GO terms from Neighborhoods
BP	GO:0048768	root hair cell tip growth	IEP	Predict GO terms from Neighborhoods
MF	GO:0050563	trans-feruloyl-CoA synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050839	cell adhesion molecule binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051069	galactomannan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051070	galactomannan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051211	anisotropic cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051231	spindle elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051851	modulation by host of symbiont process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060147	regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060148	positive regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060966	regulation of gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0061138	morphogenesis of a branching epithelium	IEP	Predict GO terms from Neighborhoods
BP	GO:0070873	regulation of glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071491	cellular response to red light	IEP	Predict GO terms from Neighborhoods
CC	GO:0072357	PTW/PP1 phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090057	root radial pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098609	cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
MF	GO:0098631	cell adhesion mediator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0098632	cell-cell adhesion mediator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0098641	cadherin binding involved in cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
MF	GO:0106286	(E)-caffeate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106290	trans-cinnamate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900368	regulation of post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1900370	positive regulation of post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
CC	GO:1903293	phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2001235	positive regulation of apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2001236	regulation of extrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2001238	positive regulation of extrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2001239	regulation of extrinsic apoptotic signaling pathway in absence of ligand	IEP	Predict GO terms from Neighborhoods
BP	GO:2001241	positive regulation of extrinsic apoptotic signaling pathway in absence of ligand	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR029044	Nucleotide-diphossugar_trans	385	711
IPR005150	Cellulose_synth	370	1128

External Links

No external refs found!

SOLTUB.AGRIA.G00000028753

Expression Profile

Co-expression Networks

Functional Annotation